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MA_10432170g0020


Description : DEAD-box ATP-dependent RNA helicase 38 OS=Arabidopsis thaliana (sp|q93zg7|rh38_arath : 261.0)


Gene families : OG0002890 (Archaeplastida) Phylogenetic Tree(s): OG0002890_tree ,
OG_05_0002756 (LandPlants) Phylogenetic Tree(s): OG_05_0002756_tree ,
OG_06_0003041 (SeedPlants) Phylogenetic Tree(s): OG_06_0003041_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10432170g0020
Cluster HCCA: Cluster_403

Target Alias Description ECC score Gene Family Method Actions
Solyc04g082790.4.1 No alias DBP5/LOS4 ATP-dependent helicase 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
BP GO:0031123 RNA 3'-end processing IEP Neighborhood
BP GO:0031124 mRNA 3'-end processing IEP Neighborhood
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 70 206
No external refs found!