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  5. MA_10432217g0030

MA_10432217g0030


Description : Pentatricopeptide repeat-containing protein At1g06710, mitochondrial OS=Arabidopsis thaliana (sp|q9m9x9|ppr18_arath : 325.0)


Gene families : OG0010507 (Archaeplastida) Phylogenetic Tree(s): OG0010507_tree ,
OG_05_0010501 (LandPlants) Phylogenetic Tree(s): OG_05_0010501_tree ,
OG_06_0010721 (SeedPlants) Phylogenetic Tree(s): OG_06_0010721_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10432217g0030
Cluster HCCA: Cluster_93

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00041260 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g06710,... 0.01 Archaeplastida
AT1G06710 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.01 Archaeplastida
GSVIVT01013571001 No alias Pentatricopeptide repeat-containing protein At1g06710,... 0.05 Archaeplastida
LOC_Os04g41140.1 No alias Pentatricopeptide repeat-containing protein At1g06710,... 0.02 Archaeplastida
Zm00001e007745_P002 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 556 602
IPR002885 Pentatricopeptide_repeat 412 461
IPR002885 Pentatricopeptide_repeat 346 390
IPR002885 Pentatricopeptide_repeat 502 534
IPR002885 Pentatricopeptide_repeat 392 410
IPR002885 Pentatricopeptide_repeat 323 341
IPR002885 Pentatricopeptide_repeat 283 312
IPR002885 Pentatricopeptide_repeat 250 276
No external refs found!