AT5G15880

Description : unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

Gene families : OG0007627 (Archaeplastida) Phylogenetic Tree(s): OG0007627_tree ,
OG_05_0006311 (LandPlants) Phylogenetic Tree(s): OG_05_0006311_tree ,
OG_06_0010066 (SeedPlants) Phylogenetic Tree(s): OG_06_0010066_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G15880
Cluster	HCCA: Cluster_51

Target	Alias	Description	ECC score	Gene Family Method	Actions
LOC_Os09g02130.1	No alias	no hits & (original description: none)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISM	Interproscan
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009250	glucan biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
BP	GO:0016192	vesicle-mediated transport	None	Extended
BP	GO:0030243	cellulose metabolic process	None	Extended
BP	GO:0030244	cellulose biosynthetic process	RCA	Interproscan
BP	GO:0033692	cellular polysaccharide biosynthetic process	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0048193	Golgi vesicle transport	RCA	Interproscan
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051273	beta-glucan metabolic process	None	Extended
BP	GO:0051274	beta-glucan biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001708	cell fate specification	IEP	Neighborhood
MF	GO:0003860	3-hydroxyisobutyryl-CoA hydrolase activity	IEP	Neighborhood
MF	GO:0004300	enoyl-CoA hydratase activity	IEP	Neighborhood
MF	GO:0004518	nuclease activity	IEP	Neighborhood
MF	GO:0004519	endonuclease activity	IEP	Neighborhood
MF	GO:0004521	endoribonuclease activity	IEP	Neighborhood
MF	GO:0004721	phosphoprotein phosphatase activity	IEP	Neighborhood
MF	GO:0004722	protein serine/threonine phosphatase activity	IEP	Neighborhood
CC	GO:0005623	cell	IEP	Neighborhood
CC	GO:0005739	mitochondrion	IEP	Neighborhood
BP	GO:0006417	regulation of translation	IEP	Neighborhood
BP	GO:0006446	regulation of translational initiation	IEP	Neighborhood
BP	GO:0006470	protein dephosphorylation	IEP	Neighborhood
BP	GO:0006631	fatty acid metabolic process	IEP	Neighborhood
MF	GO:0008320	protein transmembrane transporter activity	IEP	Neighborhood
MF	GO:0008419	RNA lariat debranching enzyme activity	IEP	Neighborhood
BP	GO:0008535	respiratory chain complex IV assembly	IEP	Neighborhood
BP	GO:0009649	entrainment of circadian clock	IEP	Neighborhood
BP	GO:0009903	chloroplast avoidance movement	IEP	Neighborhood
BP	GO:0009913	epidermal cell differentiation	IEP	Neighborhood
BP	GO:0010061	regulation of trichoblast fate specification	IEP	Neighborhood
BP	GO:0010063	positive regulation of trichoblast fate specification	IEP	Neighborhood
BP	GO:0010453	regulation of cell fate commitment	IEP	Neighborhood
BP	GO:0010455	positive regulation of cell fate commitment	IEP	Neighborhood
MF	GO:0016289	CoA hydrolase activity	IEP	Neighborhood
BP	GO:0016311	dephosphorylation	IEP	Neighborhood
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	Neighborhood
MF	GO:0016790	thiolester hydrolase activity	IEP	Neighborhood
MF	GO:0016791	phosphatase activity	IEP	Neighborhood
MF	GO:0016836	hydro-lyase activity	IEP	Neighborhood
MF	GO:0016891	endoribonuclease activity, producing 5'-phosphomonoesters	IEP	Neighborhood
MF	GO:0016893	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	IEP	Neighborhood
BP	GO:0017004	cytochrome complex assembly	IEP	Neighborhood
MF	GO:0022884	macromolecule transmembrane transporter activity	IEP	Neighborhood
BP	GO:0030855	epithelial cell differentiation	IEP	Neighborhood
BP	GO:0034248	regulation of cellular amide metabolic process	IEP	Neighborhood
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	Neighborhood
BP	GO:0042659	regulation of cell fate specification	IEP	Neighborhood
BP	GO:0042660	positive regulation of cell fate specification	IEP	Neighborhood
BP	GO:0042752	regulation of circadian rhythm	IEP	Neighborhood
MF	GO:0042887	amide transmembrane transporter activity	IEP	Neighborhood
BP	GO:0043153	entrainment of circadian clock by photoperiod	IEP	Neighborhood
BP	GO:0045597	positive regulation of cell differentiation	IEP	Neighborhood
BP	GO:0051240	positive regulation of multicellular organismal process	IEP	Neighborhood
BP	GO:1903888	regulation of plant epidermal cell differentiation	IEP	Neighborhood
BP	GO:1903890	positive regulation of plant epidermal cell differentiation	IEP	Neighborhood
MF	GO:1904680	peptide transmembrane transporter activity	IEP	Neighborhood
BP	GO:1905421	regulation of plant organ morphogenesis	IEP	Neighborhood
BP	GO:1905423	positive regulation of plant organ morphogenesis	IEP	Neighborhood
BP	GO:2000067	regulation of root morphogenesis	IEP	Neighborhood
BP	GO:2000280	regulation of root development	IEP	Neighborhood

No InterPro domains available for this sequence

External Links

No external refs found!

AT5G15880

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation