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  5. MA_10432371g0010

MA_10432371g0010


Description : component BAF255/170 of chromatin remodeling complex


Gene families : OG0000902 (Archaeplastida) Phylogenetic Tree(s): OG0000902_tree ,
OG_05_0006267 (LandPlants) Phylogenetic Tree(s): OG_05_0006267_tree ,
OG_06_0005039 (SeedPlants) Phylogenetic Tree(s): OG_06_0005039_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10432371g0010
Cluster HCCA: Cluster_412

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00072490 evm_27.TU.AmTr_v1... Chromatin organisation.chromatin remodeling... 0.03 Archaeplastida
AT4G34430 CHB3, ATSWI3D DNA-binding family protein 0.04 Archaeplastida
Cpa|evm.model.tig00000388.52 No alias Chromatin organisation.chromatin remodeling... 0.02 Archaeplastida
Cre08.g364050 No alias Chromatin organisation.chromatin remodeling... 0.02 Archaeplastida
GSVIVT01008584001 No alias Chromatin organisation.chromatin remodeling... 0.03 Archaeplastida
GSVIVT01008831001 No alias Chromatin organisation.chromatin remodeling... 0.02 Archaeplastida
GSVIVT01013428001 No alias Chromatin organisation.chromatin remodeling... 0.02 Archaeplastida
LOC_Os04g40420.1 No alias component BAF255/170 of chromatin remodeling complex 0.05 Archaeplastida
LOC_Os12g07730.1 No alias component BAF255/170 of chromatin remodeling complex 0.04 Archaeplastida
Mp8g15610.1 No alias component BAF255/170 of chromatin remodeling complex 0.02 Archaeplastida
Pp3c10_9060V3.1 No alias SWITCH/sucrose nonfermenting 3C 0.04 Archaeplastida
Pp3c16_6830V3.1 No alias DNA-binding family protein 0.04 Archaeplastida
Pp3c25_660V3.1 No alias SWITCH/sucrose nonfermenting 3C 0.03 Archaeplastida
Pp3c2_24980V3.1 No alias switch subunit 3 0.03 Archaeplastida
Solyc01g109510.3.1 No alias component BAF255/170 of chromatin remodeling complex 0.02 Archaeplastida
Zm00001e018409_P001 No alias component BAF255/170 of chromatin remodeling complex 0.04 Archaeplastida
Zm00001e024548_P001 No alias component BAF255/170 of chromatin remodeling complex 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003689 DNA clamp loader activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
MF GO:0005096 GTPase activator activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005663 DNA replication factor C complex IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
BP GO:0007186 G-protein coupled receptor signaling pathway IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
MF GO:0008094 DNA-dependent ATPase activity IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
MF GO:0016407 acetyltransferase activity IEP Neighborhood
MF GO:0016410 N-acyltransferase activity IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
CC GO:0030684 preribosome IEP Neighborhood
CC GO:0030688 preribosome, small subunit precursor IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP Neighborhood
MF GO:0033170 protein-DNA loading ATPase activity IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0044877 protein-containing complex binding IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR007526 SWIRM 150 235
IPR032451 SMARCC_C 404 465
IPR001005 SANT/Myb 381 408
IPR000433 Znf_ZZ 322 354
No external refs found!