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Description : INVOLVED IN: nucleotide-excision repair; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), UV excision repair protein Rad23 (InterPro:IPR004806), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: Rad23 UV excision repair protein family (TAIR:AT3G02540.1); Has 1311 Blast hits to 954 proteins in 240 species: Archae - 0; Bacteria - 0; Metazoa - 634; Fungi - 179; Plants - 321; Viruses - 27; Other Eukaryotes - 150 (source: NCBI BLink).
Gene families : OG0001284 (Archaeplastida) Phylogenetic Tree(s): OG0001284_tree ,
OG_05_0001166 (LandPlants) Phylogenetic Tree(s): OG_05_0001166_tree ,
OG_06_0001263 (SeedPlants) Phylogenetic Tree(s): OG_06_0001263_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT5G16090 | |
| Cluster | HCCA: Cluster_184 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005737 | cytoplasm | ISM | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003886 | DNA (cytosine-5-)-methyltransferase activity | IEP | Neighborhood |
| CC | GO:0005634 | nucleus | IEP | Neighborhood |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Neighborhood |
| BP | GO:0007163 | establishment or maintenance of cell polarity | IEP | Neighborhood |
| MF | GO:0009008 | DNA-methyltransferase activity | IEP | Neighborhood |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Neighborhood |
| MF | GO:0016746 | transferase activity, transferring acyl groups | IEP | Neighborhood |
| MF | GO:0016755 | transferase activity, transferring amino-acyl groups | IEP | Neighborhood |
| MF | GO:0016756 | glutathione gamma-glutamylcysteinyltransferase activity | IEP | Neighborhood |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0030010 | establishment of cell polarity | IEP | Neighborhood |
| BP | GO:0046937 | phytochelatin metabolic process | IEP | Neighborhood |
| BP | GO:0046938 | phytochelatin biosynthetic process | IEP | Neighborhood |
| BP | GO:0048859 | formation of anatomical boundary | IEP | Neighborhood |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Neighborhood |
| BP | GO:0060341 | regulation of cellular localization | IEP | Neighborhood |
| BP | GO:0080154 | regulation of fertilization | IEP | Neighborhood |
| BP | GO:0080155 | regulation of double fertilization forming a zygote and endosperm | IEP | Neighborhood |
| BP | GO:0090451 | cotyledon boundary formation | IEP | Neighborhood |
| BP | GO:0090691 | formation of plant organ boundary | IEP | Neighborhood |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Neighborhood |
| BP | GO:1903827 | regulation of cellular protein localization | IEP | Neighborhood |
| BP | GO:2000008 | regulation of protein localization to cell surface | IEP | Neighborhood |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Neighborhood |
| No external refs found! |