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  5. MA_10432774g0010

MA_10432774g0010


Description : no hits & (original description: none)


Gene families : OG0006182 (Archaeplastida) Phylogenetic Tree(s): OG0006182_tree ,
OG_05_0007511 (LandPlants) Phylogenetic Tree(s): OG_05_0007511_tree ,
OG_06_0008976 (SeedPlants) Phylogenetic Tree(s): OG_06_0008976_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10432774g0010
Cluster HCCA: Cluster_256

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00201600 evm_27.TU.AmTr_v1... E3 ubiquitin-protein ligase listerin OS=Arabidopsis thaliana 0.07 Archaeplastida
AT5G58410 No alias HEAT/U-box domain-containing protein 0.05 Archaeplastida
Cpa|evm.model.tig00000144.121 No alias E3 ubiquitin-protein ligase listerin OS=Arabidopsis thaliana 0.02 Archaeplastida
Cre06.g252100 No alias E3 ubiquitin-protein ligase listerin OS=Arabidopsis thaliana 0.03 Archaeplastida
LOC_Os01g74610.1 No alias E3 ubiquitin ligase component LTN1 of... 0.06 Archaeplastida
MA_10269878g0010 No alias No annotation 0.06 Archaeplastida
Mp7g07340.1 No alias E3 ubiquitin ligase component LTN1 of... 0.02 Archaeplastida
Pp3c11_1040V3.1 No alias HEAT/U-box domain-containing protein 0.03 Archaeplastida
Smo437336 No alias E3 ubiquitin-protein ligase listerin OS=Arabidopsis thaliana 0.03 Archaeplastida
Solyc09g055260.4.1 No alias E3 ubiquitin-protein ligase listerin OS=Arabidopsis... 0.08 Archaeplastida
Zm00001e009194_P003 No alias E3 ubiquitin ligase component LTN1 of... 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Neighborhood
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Neighborhood
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
MF GO:0010181 FMN binding IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017069 snRNA binding IEP Neighborhood
MF GO:0017070 U6 snRNA binding IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
MF GO:0030623 U5 snRNA binding IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
BP GO:0043248 proteasome assembly IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
MF GO:0060090 molecular adaptor activity IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!