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  5. AT1G22240

AT1G22240 (APUM8, PUM8)


Aliases : APUM8, PUM8

Description : pumilio 8


Gene families : OG0000964 (Archaeplastida) Phylogenetic Tree(s): OG0000964_tree ,
OG_05_0000819 (LandPlants) Phylogenetic Tree(s): OG_05_0000819_tree ,
OG_06_0001861 (SeedPlants) Phylogenetic Tree(s): OG_06_0001861_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G22240
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
Pp3c6_20180V3.1 No alias pumilio 12 0.02 Archaeplastida
Zm00001e039642_P002 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding ISS Interproscan
CC GO:0005737 cytoplasm IDA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEP Neighborhood
MF GO:0004396 hexokinase activity IEP Neighborhood
MF GO:0004448 isocitrate dehydrogenase activity IEP Neighborhood
MF GO:0004449 isocitrate dehydrogenase (NAD+) activity IEP Neighborhood
MF GO:0004565 beta-galactosidase activity IEP Neighborhood
MF GO:0005337 nucleoside transmembrane transporter activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005795 Golgi stack IEP Neighborhood
BP GO:0006099 tricarboxylic acid cycle IEP Neighborhood
BP GO:0006101 citrate metabolic process IEP Neighborhood
BP GO:0006102 isocitrate metabolic process IEP Neighborhood
BP GO:0009555 pollen development IEP Neighborhood
BP GO:0009786 regulation of asymmetric cell division IEP Neighborhood
BP GO:0010208 pollen wall assembly IEP Neighborhood
BP GO:0010584 pollen exine formation IEP Neighborhood
BP GO:0010927 cellular component assembly involved in morphogenesis IEP Neighborhood
MF GO:0016211 ammonia ligase activity IEP Neighborhood
CC GO:0016459 myosin complex IEP Neighborhood
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
BP GO:0048229 gametophyte development IEP Neighborhood
BP GO:0060211 regulation of nuclear-transcribed mRNA poly(A) tail shortening IEP Neighborhood
BP GO:0061013 regulation of mRNA catabolic process IEP Neighborhood
BP GO:1900151 regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay IEP Neighborhood
BP GO:1903311 regulation of mRNA metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001313 Pumilio_RNA-bd_rpt 235 268
IPR001313 Pumilio_RNA-bd_rpt 419 445
IPR001313 Pumilio_RNA-bd_rpt 349 372
IPR001313 Pumilio_RNA-bd_rpt 312 344
No external refs found!