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  5. AT1G22250

AT1G22250


Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G78170.1); Has 64 Blast hits to 64 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).


Gene families : OG0001362 (Archaeplastida) Phylogenetic Tree(s): OG0001362_tree ,
OG_05_0000882 (LandPlants) Phylogenetic Tree(s): OG_05_0000882_tree ,
OG_06_0002520 (SeedPlants) Phylogenetic Tree(s): OG_06_0002520_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G22250
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00038p00161690 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AT1G78170 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.06 Archaeplastida
GSVIVT01013547001 No alias No description available 0.09 Archaeplastida
LOC_Os02g31140.1 No alias CFL cutin and suberin biosynthesis regulator 0.05 Archaeplastida
LOC_Os12g13100.1 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_22755g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_941055g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c14_14200V3.1 No alias No annotation 0.03 Archaeplastida
Pp3c1_32020V3.1 No alias No annotation 0.04 Archaeplastida
Solyc04g074080.3.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e038823_P001 No alias no hits & (original description: none) 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Neighborhood
CC GO:0000793 condensed chromosome IEP Neighborhood
BP GO:0001101 response to acid chemical IEP Neighborhood
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0001872 (1->3)-beta-D-glucan binding IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003999 adenine phosphoribosyltransferase activity IEP Neighborhood
MF GO:0004560 alpha-L-fucosidase activity IEP Neighborhood
CC GO:0005654 nucleoplasm IEP Neighborhood
CC GO:0005694 chromosome IEP Neighborhood
BP GO:0007389 pattern specification process IEP Neighborhood
BP GO:0008356 asymmetric cell division IEP Neighborhood
BP GO:0009653 anatomical structure morphogenesis IEP Neighborhood
BP GO:0009751 response to salicylic acid IEP Neighborhood
BP GO:0009753 response to jasmonic acid IEP Neighborhood
BP GO:0009798 axis specification IEP Neighborhood
BP GO:0009909 regulation of flower development IEP Neighborhood
BP GO:0009911 positive regulation of flower development IEP Neighborhood
BP GO:0009946 proximal/distal axis specification IEP Neighborhood
BP GO:0009965 leaf morphogenesis IEP Neighborhood
BP GO:0010103 stomatal complex morphogenesis IEP Neighborhood
BP GO:0010143 cutin biosynthetic process IEP Neighborhood
BP GO:0010199 organ boundary specification between lateral organs and the meristem IEP Neighborhood
BP GO:0010229 inflorescence development IEP Neighborhood
BP GO:0010305 leaf vascular tissue pattern formation IEP Neighborhood
BP GO:0010338 leaf formation IEP Neighborhood
BP GO:0010588 cotyledon vascular tissue pattern formation IEP Neighborhood
MF GO:0015928 fucosidase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0033993 response to lipid IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
MF GO:0047434 indolepyruvate decarboxylase activity IEP Neighborhood
BP GO:0048367 shoot system development IEP Neighborhood
BP GO:0048580 regulation of post-embryonic development IEP Neighborhood
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP Neighborhood
BP GO:0048731 system development IEP Neighborhood
BP GO:0048831 regulation of shoot system development IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
BP GO:0048859 formation of anatomical boundary IEP Neighborhood
BP GO:0050793 regulation of developmental process IEP Neighborhood
BP GO:0051239 regulation of multicellular organismal process IEP Neighborhood
BP GO:0090626 plant epidermis morphogenesis IEP Neighborhood
BP GO:0090691 formation of plant organ boundary IEP Neighborhood
BP GO:0090698 post-embryonic plant morphogenesis IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
BP GO:0099402 plant organ development IEP Neighborhood
MF GO:0106130 purine phosphoribosyltransferase activity IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1905392 plant organ morphogenesis IEP Neighborhood
BP GO:2000024 regulation of leaf development IEP Neighborhood
BP GO:2000026 regulation of multicellular organismal development IEP Neighborhood
BP GO:2000241 regulation of reproductive process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!