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  5. MA_10433091g0010

MA_10433091g0010


Description : Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidopsis thaliana (sp|q9lq14|ppr96_arath : 324.0)


Gene families : OG0001630 (Archaeplastida) Phylogenetic Tree(s): OG0001630_tree ,
OG_05_0001046 (LandPlants) Phylogenetic Tree(s): OG_05_0001046_tree ,
OG_06_0000527 (SeedPlants) Phylogenetic Tree(s): OG_06_0000527_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10433091g0010
Cluster HCCA: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
MA_10430293g0020 No alias Pentatricopeptide repeat-containing protein At3g22470,... 0.03 Archaeplastida
MA_10432772g0010 No alias Pentatricopeptide repeat-containing protein At3g22470,... 0.07 Archaeplastida
MA_122851g0010 No alias Pentatricopeptide repeat-containing protein At1g12775,... 0.11 Archaeplastida
MA_175359g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.03 Archaeplastida
MA_32560g0010 No alias Pentatricopeptide repeat-containing protein At3g22470,... 0.04 Archaeplastida
MA_47344g0010 No alias Pentatricopeptide repeat-containing protein At5g39710... 0.07 Archaeplastida
MA_78481g0010 No alias Pentatricopeptide repeat-containing protein At1g63130,... 0.1 Archaeplastida
MA_89072g0010 No alias Pentatricopeptide repeat-containing protein At3g22470,... 0.06 Archaeplastida
MA_914400g0010 No alias Pentatricopeptide repeat-containing protein At5g55840... 0.07 Archaeplastida
MA_9542585g0010 No alias Pentatricopeptide repeat-containing protein At5g55840... 0.05 Archaeplastida
MA_959553g0010 No alias Pentatricopeptide repeat-containing protein At1g62910... 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 489 538
IPR002885 Pentatricopeptide_repeat 238 287
IPR002885 Pentatricopeptide_repeat 419 468
IPR002885 Pentatricopeptide_repeat 133 182
IPR002885 Pentatricopeptide_repeat 199 231
IPR002885 Pentatricopeptide_repeat 380 413
IPR002885 Pentatricopeptide_repeat 304 335
IPR002885 Pentatricopeptide_repeat 70 101
IPR002885 Pentatricopeptide_repeat 40 68
IPR002885 Pentatricopeptide_repeat 105 131
No external refs found!