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  5. MA_10433108g0010

MA_10433108g0010


Description : Putative pentatricopeptide repeat-containing protein At5g43820 OS=Arabidopsis thaliana (sp|p0c8r0|pp416_arath : 351.0)


Gene families : OG0000152 (Archaeplastida) Phylogenetic Tree(s): OG0000152_tree ,
OG_05_0000102 (LandPlants) Phylogenetic Tree(s): OG_05_0000102_tree ,
OG_06_0009591 (SeedPlants) Phylogenetic Tree(s): OG_06_0009591_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10433108g0010
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
Pp3c5_26320V3.1 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 167 212
IPR002885 Pentatricopeptide_repeat 97 146
IPR002885 Pentatricopeptide_repeat 237 281
IPR002885 Pentatricopeptide_repeat 311 340
IPR002885 Pentatricopeptide_repeat 1 23
IPR002885 Pentatricopeptide_repeat 69 94
IPR002885 Pentatricopeptide_repeat 34 61
No external refs found!