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  5. MA_10433306g0010

MA_10433306g0010


Description : NUP188 scaffold nucleoporin of nuclear pore complex


Gene families : OG0006117 (Archaeplastida) Phylogenetic Tree(s): OG0006117_tree ,
OG_05_0008610 (LandPlants) Phylogenetic Tree(s): OG_05_0008610_tree ,
OG_06_0008942 (SeedPlants) Phylogenetic Tree(s): OG_06_0008942_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10433306g0010
Cluster HCCA: Cluster_256

Target Alias Description ECC score Gene Family Method Actions
AT4G38760 No alias Protein of unknown function (DUF3414) 0.06 Archaeplastida
GSVIVT01024075001 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.08 Archaeplastida
Gb_15236 No alias NUP188 scaffold nucleoporin of nuclear pore complex 0.03 Archaeplastida
LOC_Os10g06610.1 No alias NUP188 scaffold nucleoporin of nuclear pore complex 0.04 Archaeplastida
Mp1g18700.1 No alias NUP188 scaffold nucleoporin of nuclear pore complex 0.02 Archaeplastida
Pp3c5_12360V3.1 No alias Protein of unknown function (DUF3414) 0.04 Archaeplastida
Solyc11g039880.2.1 No alias NUP188 scaffold nucleoporin of nuclear pore complex 0.06 Archaeplastida
Solyc11g039890.2.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e002662_P001 No alias NUP188 scaffold nucleoporin of nuclear pore complex 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Neighborhood
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005643 nuclear pore IEP Neighborhood
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Neighborhood
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017056 structural constituent of nuclear pore IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!