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  5. MA_10433522g0020

MA_10433522g0020


Description : Exosome complex exonuclease RRP44 homolog A OS=Arabidopsis thaliana (sp|q9shl7|rp44a_arath : 377.0)


Gene families : OG0001141 (Archaeplastida) Phylogenetic Tree(s): OG0001141_tree ,
OG_05_0003821 (LandPlants) Phylogenetic Tree(s): OG_05_0003821_tree ,
OG_06_0004809 (SeedPlants) Phylogenetic Tree(s): OG_06_0004809_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10433522g0020
Cluster HCCA: Cluster_403

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00129280 evm_27.TU.AmTr_v1... RNA processing.RNA decay.exosome complex.associated... 0.04 Archaeplastida
AT2G17510 EMB2763 ribonuclease II family protein 0.03 Archaeplastida
Cpa|evm.model.tig00000640.22 No alias Exosome complex exonuclease RRP44 homolog A... 0.01 Archaeplastida
Cre14.g613850 No alias Exosome complex exonuclease RRP44 homolog A... 0.05 Archaeplastida
GSVIVT01022300001 No alias RNA processing.RNA decay.exosome complex.associated... 0.04 Archaeplastida
LOC_Os03g03710.1 No alias exoribonuclease (Dis3/RRP44) 0.04 Archaeplastida
Mp3g18110.1 No alias Exosome complex exonuclease RRP44 homolog A... 0.03 Archaeplastida
Mp8g05460.1 No alias exoribonuclease (Dis3/RRP44) 0.02 Archaeplastida
Pp3c16_17530V3.1 No alias ribonuclease II family protein 0.04 Archaeplastida
Solyc02g082460.3.1 No alias exoribonuclease (Dis3/RRP44) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0004540 ribonuclease activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
MF GO:0005049 nuclear export signal receptor activity IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006298 mismatch repair IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
CC GO:0030684 preribosome IEP Neighborhood
CC GO:0030688 preribosome, small subunit precursor IEP Neighborhood
MF GO:0030983 mismatched DNA binding IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
MF GO:0140104 molecular carrier activity IEP Neighborhood
MF GO:0140142 nucleocytoplasmic carrier activity IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!