MA_10433549g0010


Description : Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana (sp|q9svp7|pp307_arath : 543.0)


Gene families : OG0030506 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0028322 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0026618 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10433549g0010
Cluster HCCA: Cluster_469

Target Alias Description ECC score Gene Family Method Actions
Gb_26310 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 240 286
IPR002885 Pentatricopeptide_repeat 566 613
IPR002885 Pentatricopeptide_repeat 139 186
IPR002885 Pentatricopeptide_repeat 667 715
IPR002885 Pentatricopeptide_repeat 402 450
IPR002885 Pentatricopeptide_repeat 478 504
IPR002885 Pentatricopeptide_repeat 315 342
IPR002885 Pentatricopeptide_repeat 506 536
IPR002885 Pentatricopeptide_repeat 741 765
IPR002885 Pentatricopeptide_repeat 343 373
No external refs found!