Description : mRNA-binding regulatory factor (RBP45/47)
Gene families : OG0000444 (Archaeplastida) Phylogenetic Tree(s): OG0000444_tree ,
OG_05_0011791 (LandPlants) Phylogenetic Tree(s): OG_05_0011791_tree ,
OG_06_0013864 (SeedPlants) Phylogenetic Tree(s): OG_06_0013864_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: MA_10433660g0010 | |
Cluster | HCCA: Cluster_321 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00062p00161920 | evm_27.TU.AmTr_v1... | Polyadenylate-binding protein RBP47B OS=Arabidopsis thaliana | 0.02 | Archaeplastida | |
Cre16.g652900 | No alias | Polyadenylate-binding protein RBP45A OS=Arabidopsis thaliana | 0.02 | Archaeplastida | |
GSVIVT01037634001 | No alias | Polyadenylate-binding protein RBP45 OS=Nicotiana plumbaginifolia | 0.02 | Archaeplastida | |
GSVIVT01037635001 | No alias | Polyadenylate-binding protein RBP45C OS=Arabidopsis thaliana | 0.02 | Archaeplastida | |
Gb_06023 | No alias | mRNA-binding regulatory factor (RBP45/47) | 0.04 | Archaeplastida | |
Gb_20978 | No alias | mRNA-binding regulatory factor (RBP45/47) | 0.03 | Archaeplastida | |
Gb_20979 | No alias | Polyadenylate-binding protein RBP47 OS=Nicotiana... | 0.02 | Archaeplastida | |
Gb_24595 | No alias | mRNA-binding regulatory factor (RBP45/47) | 0.03 | Archaeplastida | |
LOC_Os03g07800.1 | No alias | mRNA-binding regulatory factor (RBP45/47) | 0.02 | Archaeplastida | |
LOC_Os07g33330.1 | No alias | mRNA-binding regulatory factor (RBP45/47) | 0.03 | Archaeplastida | |
MA_108444g0010 | No alias | Polyadenylate-binding protein RBP45 OS=Nicotiana... | 0.02 | Archaeplastida | |
Pp3c12_10910V3.1 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.02 | Archaeplastida | |
Pp3c12_10960V3.1 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.02 | Archaeplastida | |
Pp3c4_13300V3.1 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.02 | Archaeplastida | |
Smo80061 | No alias | Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia | 0.03 | Archaeplastida | |
Solyc03g031720.3.1 | No alias | mRNA-binding regulatory factor (RBP45/47) | 0.06 | Archaeplastida | |
Solyc10g005260.3.1 | No alias | mRNA-binding regulatory factor (RBP45/47) | 0.04 | Archaeplastida | |
Solyc10g050860.3.1 | No alias | mRNA-binding regulatory factor (RBP45/47) | 0.02 | Archaeplastida | |
Zm00001e000547_P001 | No alias | mRNA-binding regulatory factor (RBP45/47) | 0.03 | Archaeplastida | |
Zm00001e006878_P004 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
Zm00001e010479_P003 | No alias | mRNA-binding regulatory factor (RBP45/47) | 0.04 | Archaeplastida | |
Zm00001e021626_P001 | No alias | mRNA-binding regulatory factor (RBP45/47) | 0.01 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000462 | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | IEP | Neighborhood |
MF | GO:0000774 | adenyl-nucleotide exchange factor activity | IEP | Neighborhood |
MF | GO:0003723 | RNA binding | IEP | Neighborhood |
MF | GO:0003746 | translation elongation factor activity | IEP | Neighborhood |
MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | Neighborhood |
BP | GO:0006364 | rRNA processing | IEP | Neighborhood |
BP | GO:0006396 | RNA processing | IEP | Neighborhood |
BP | GO:0006414 | translational elongation | IEP | Neighborhood |
BP | GO:0006457 | protein folding | IEP | Neighborhood |
MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
MF | GO:0008565 | protein transporter activity | IEP | Neighborhood |
BP | GO:0016070 | RNA metabolic process | IEP | Neighborhood |
BP | GO:0016072 | rRNA metabolic process | IEP | Neighborhood |
MF | GO:0016853 | isomerase activity | IEP | Neighborhood |
MF | GO:0016859 | cis-trans isomerase activity | IEP | Neighborhood |
BP | GO:0030490 | maturation of SSU-rRNA | IEP | Neighborhood |
MF | GO:0030515 | snoRNA binding | IEP | Neighborhood |
MF | GO:0032977 | membrane insertase activity | IEP | Neighborhood |
BP | GO:0034470 | ncRNA processing | IEP | Neighborhood |
BP | GO:0034660 | ncRNA metabolic process | IEP | Neighborhood |
MF | GO:0042802 | identical protein binding | IEP | Neighborhood |
MF | GO:0042803 | protein homodimerization activity | IEP | Neighborhood |
MF | GO:0043167 | ion binding | IEP | Neighborhood |
MF | GO:0043169 | cation binding | IEP | Neighborhood |
MF | GO:0046872 | metal ion binding | IEP | Neighborhood |
MF | GO:0046914 | transition metal ion binding | IEP | Neighborhood |
MF | GO:0051087 | chaperone binding | IEP | Neighborhood |
MF | GO:0060589 | nucleoside-triphosphatase regulator activity | IEP | Neighborhood |
MF | GO:0060590 | ATPase regulator activity | IEP | Neighborhood |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
No external refs found! |