Description : SSU processome assembly factor (NOC4)

Gene families : OG0005931 (Archaeplastida) Phylogenetic Tree(s): OG0005931_tree ,
OG_05_0007010 (LandPlants) Phylogenetic Tree(s): OG_05_0007010_tree ,
OG_06_0008812 (SeedPlants) Phylogenetic Tree(s): OG_06_0008812_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: MA_10433722g0010
Cluster HCCA: Cluster_403

Target Alias Description ECC score Gene Family Method Actions
Cre01.g068377 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 Archaeplastida
Mp1g06620.1 No alias SSU processome assembly factor (NOC4) 0.02 Archaeplastida
Pp3c9_12610V3.1 No alias CCAAT-binding factor 0.02 Archaeplastida
Solyc10g074560.2.1 No alias SSU processome assembly factor (NOC4) 0.03 Archaeplastida
Zm00001e041386_P001 No alias SSU processome assembly factor (NOC4) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005732 small nucleolar ribonucleoprotein complex IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
CC GO:0034457 Mpp10 complex IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044452 nucleolar part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR005612 CCAAT-binding_factor 39 208
No external refs found!