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  5. AT5G17240

AT5G17240 (SDG40)


Aliases : SDG40

Description : SET domain group 40


Gene families : OG0006223 (Archaeplastida) Phylogenetic Tree(s): OG0006223_tree ,
OG_05_0006236 (LandPlants) Phylogenetic Tree(s): OG_05_0006236_tree ,
OG_06_0007785 (SeedPlants) Phylogenetic Tree(s): OG_06_0007785_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G17240
Cluster HCCA: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00046290 evm_27.TU.AmTr_v1... Protein SET DOMAIN GROUP 40 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00044p00046630 evm_27.TU.AmTr_v1... Protein SET DOMAIN GROUP 40 OS=Arabidopsis thaliana 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0009507 chloroplast ISM Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
CC GO:0005887 integral component of plasma membrane IEP Neighborhood
BP GO:0006605 protein targeting IEP Neighborhood
BP GO:0006626 protein targeting to mitochondrion IEP Neighborhood
BP GO:0006644 phospholipid metabolic process IEP Neighborhood
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Neighborhood
BP GO:0006665 sphingolipid metabolic process IEP Neighborhood
BP GO:0006839 mitochondrial transport IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0008195 phosphatidate phosphatase activity IEP Neighborhood
MF GO:0008417 fucosyltransferase activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0017001 antibiotic catabolic process IEP Neighborhood
CC GO:0031226 intrinsic component of plasma membrane IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
BP GO:0042743 hydrogen peroxide metabolic process IEP Neighborhood
BP GO:0042744 hydrogen peroxide catabolic process IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046488 phosphatidylinositol metabolic process IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0051187 cofactor catabolic process IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0070585 protein localization to mitochondrion IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
BP GO:0072655 establishment of protein localization to mitochondrion IEP Neighborhood
InterPro domains Description Start Stop
IPR001214 SET_dom 48 278
No external refs found!