MA_10433906g0010

Description : Flowering locus K homology domain OS=Arabidopsis thaliana (sp|q9sr13|flk_arath : 237.0)

Gene families : OG0001697 (Archaeplastida) Phylogenetic Tree(s): OG0001697_tree ,
OG_05_0001748 (LandPlants) Phylogenetic Tree(s): OG_05_0001748_tree ,
OG_06_0003559 (SeedPlants) Phylogenetic Tree(s): OG_06_0003559_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_10433906g0010
Cluster	HCCA: Cluster_403

Target	Alias	Description	ECC score	Gene Family Method
LOC_Os03g42900.1	No alias	Flowering locus K homology domain OS=Arabidopsis...	0.03	Archaeplastida
LOC_Os10g41440.1	No alias	RNA-binding KH domain-containing protein PEPPER...	0.02	Archaeplastida
Solyc09g066120.4.1	No alias	Flowering locus K homology domain OS=Arabidopsis...	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0001522	pseudouridine synthesis	IEP	Neighborhood
MF	GO:0003743	translation initiation factor activity	IEP	Neighborhood
CC	GO:0005737	cytoplasm	IEP	Neighborhood
BP	GO:0006413	translational initiation	IEP	Neighborhood
MF	GO:0008135	translation factor activity, RNA binding	IEP	Neighborhood
MF	GO:0008270	zinc ion binding	IEP	Neighborhood
BP	GO:0009451	RNA modification	IEP	Neighborhood
MF	GO:0009982	pseudouridine synthase activity	IEP	Neighborhood
MF	GO:0016866	intramolecular transferase activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR004088	KH_dom_type_1	185	248

External Links

No external refs found!