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  5. AT5G17580

AT5G17580


Description : Phototropic-responsive NPH3 family protein


Gene families : OG0000044 (Archaeplastida) Phylogenetic Tree(s): OG0000044_tree ,
OG_05_0000474 (LandPlants) Phylogenetic Tree(s): OG_05_0000474_tree ,
OG_06_0000452 (SeedPlants) Phylogenetic Tree(s): OG_06_0000452_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G17580
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00135p00069650 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AT5G03250 No alias Phototropic-responsive NPH3 family protein 0.07 Archaeplastida
AT5G13600 No alias Phototropic-responsive NPH3 family protein 0.11 Archaeplastida
GSVIVT01003773001 No alias BTB/POZ domain-containing protein At5g66560... 0.02 Archaeplastida
GSVIVT01006403001 No alias BTB/POZ domain-containing protein At3g22104... 0.03 Archaeplastida
LOC_Os01g57230.1 No alias BTB/POZ domain-containing protein At5g03250... 0.04 Archaeplastida
LOC_Os12g02530.2 No alias Root phototropism protein 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Pp3c3_20030V3.1 No alias Phototropic-responsive NPH3 family protein 0.02 Archaeplastida
Pp3c8_17100V3.1 No alias Phototropic-responsive NPH3 family protein 0.02 Archaeplastida
Solyc01g081140.1.1 No alias BTB/POZ domain-containing protein At5g17580... 0.06 Archaeplastida
Solyc06g073480.3.1 No alias BTB/POZ domain-containing protein At5g17580... 0.06 Archaeplastida
Solyc09g007820.2.1 No alias BTB/POZ domain-containing protein At5g03250... 0.04 Archaeplastida
Zm00001e019629_P002 No alias BTB/POZ domain-containing protein At5g03250... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004871 obsolete signal transducer activity ISS Interproscan
CC GO:0005886 plasma membrane ISM Interproscan
BP GO:0009416 response to light stimulus ISS Interproscan
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Type GO Term Name Evidence Source
MF GO:0005351 carbohydrate:proton symporter activity IEP Neighborhood
MF GO:0005375 copper ion transmembrane transporter activity IEP Neighborhood
MF GO:0005402 carbohydrate:cation symporter activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005887 integral component of plasma membrane IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
MF GO:0008519 ammonium transmembrane transporter activity IEP Neighborhood
BP GO:0009555 pollen development IEP Neighborhood
BP GO:0010208 pollen wall assembly IEP Neighborhood
BP GO:0010584 pollen exine formation IEP Neighborhood
BP GO:0010927 cellular component assembly involved in morphogenesis IEP Neighborhood
MF GO:0015089 high-affinity copper ion transmembrane transporter activity IEP Neighborhood
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Neighborhood
MF GO:0015114 phosphate ion transmembrane transporter activity IEP Neighborhood
MF GO:0015144 carbohydrate transmembrane transporter activity IEP Neighborhood
MF GO:0015145 monosaccharide transmembrane transporter activity IEP Neighborhood
MF GO:0015398 high-affinity secondary active ammonium transmembrane transporter activity IEP Neighborhood
BP GO:0015695 organic cation transport IEP Neighborhood
BP GO:0015749 monosaccharide transmembrane transport IEP Neighborhood
BP GO:0018126 protein hydroxylation IEP Neighborhood
BP GO:0018401 peptidyl-proline hydroxylation to 4-hydroxy-L-proline IEP Neighborhood
BP GO:0019471 4-hydroxyproline metabolic process IEP Neighborhood
BP GO:0019511 peptidyl-proline hydroxylation IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0034219 carbohydrate transmembrane transport IEP Neighborhood
BP GO:0048444 floral organ morphogenesis IEP Neighborhood
MF GO:0051119 sugar transmembrane transporter activity IEP Neighborhood
BP GO:0072488 ammonium transmembrane transport IEP Neighborhood
BP GO:0090697 post-embryonic plant organ morphogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR000210 BTB/POZ_dom 6 91
IPR027356 NPH3_dom 180 416
No external refs found!