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  5. MA_10434164g0020

MA_10434164g0020


Description : no hits & (original description: none)


Gene families : OG0001895 (Archaeplastida) Phylogenetic Tree(s): OG0001895_tree ,
OG_05_0001910 (LandPlants) Phylogenetic Tree(s): OG_05_0001910_tree ,
OG_06_0001734 (SeedPlants) Phylogenetic Tree(s): OG_06_0001734_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10434164g0020
Cluster HCCA: Cluster_393

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00036p00235910 evm_27.TU.AmTr_v1... No description available 0.06 Archaeplastida
AMTR_s00099p00056810 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00169p00047130 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
Cpa|evm.model.tig00020553.157 No alias Protein BTR1 OS=Arabidopsis thaliana 0.01 Archaeplastida
Gb_31122 No alias Protein BTR1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os02g13130.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os08g01930.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Pp3c11_17830V3.1 No alias KH domain-containing protein 0.02 Archaeplastida
Pp3c7_11410V3.1 No alias KH domain-containing protein 0.05 Archaeplastida
Solyc11g040370.2.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc12g095960.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e014452_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e021868_P005 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e024927_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e029163_P001 No alias no hits & (original description: none) 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003729 mRNA binding IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
CC GO:0005669 transcription factor TFIID complex IEP Neighborhood
CC GO:0005685 U1 snRNP IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006376 mRNA splice site selection IEP Neighborhood
BP GO:0006914 autophagy IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0016197 endosomal transport IEP Neighborhood
BP GO:0016482 cytosolic transport IEP Neighborhood
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Neighborhood
CC GO:0030906 retromer, cargo-selective complex IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0042147 retrograde transport, endosome to Golgi IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Neighborhood
BP GO:0061919 process utilizing autophagic mechanism IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood
CC GO:0097525 spliceosomal snRNP complex IEP Neighborhood
CC GO:0120114 Sm-like protein family complex IEP Neighborhood
CC GO:1902554 serine/threonine protein kinase complex IEP Neighborhood
CC GO:1902911 protein kinase complex IEP Neighborhood
CC GO:1990316 Atg1/ULK1 kinase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 216 283
IPR004088 KH_dom_type_1 123 187
No external refs found!