1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_10434186g0010

MA_10434186g0010


Description : histone demethylase (PKDM7). transcription factor (JUMONJI)


Gene families : OG0001111 (Archaeplastida) Phylogenetic Tree(s): OG0001111_tree ,
OG_05_0001701 (LandPlants) Phylogenetic Tree(s): OG_05_0001701_tree ,
OG_06_0001587 (SeedPlants) Phylogenetic Tree(s): OG_06_0001587_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10434186g0010
Cluster HCCA: Cluster_437

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00253500 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.JUMONJI... 0.05 Archaeplastida
AT1G08620 PKDM7D Transcription factor jumonji (jmj) family protein / zinc... 0.09 Archaeplastida
AT1G63490 No alias transcription factor jumonji (jmjC) domain-containing protein 0.06 Archaeplastida
GSVIVT01019761001 No alias RNA biosynthesis.transcriptional activation.JUMONJI... 0.03 Archaeplastida
GSVIVT01023517001 No alias RNA biosynthesis.transcriptional activation.JUMONJI... 0.13 Archaeplastida
Gb_26073 No alias histone demethylase (KDM5). transcription factor (JUMONJI) 0.02 Archaeplastida
Gb_27431 No alias histone demethylase (PKDM7). transcription factor (JUMONJI) 0.05 Archaeplastida
MA_91656g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
Mp6g20340.1 No alias histone demethylase (PKDM7). transcription factor (JUMONJI) 0.02 Archaeplastida
Mp8g17910.1 No alias histone demethylase (KDM5). transcription factor (JUMONJI) 0.07 Archaeplastida
Pp3c16_4220V3.1 No alias Transcription factor jumonji (jmj) family protein / zinc... 0.02 Archaeplastida
Pp3c21_10100V3.1 No alias JUMONJI 14 0.04 Archaeplastida
Pp3c21_10500V3.1 No alias transcription factor jumonji (jmjC) domain-containing protein 0.03 Archaeplastida
Solyc08g081000.3.1 No alias histone demethylase (KDM5). transcription factor (JUMONJI) 0.04 Archaeplastida
Zm00001e030938_P001 No alias histone demethylase (PKDM7). transcription factor (JUMONJI) 0.05 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
BP GO:0009966 regulation of signal transduction IEP Neighborhood
BP GO:0010646 regulation of cell communication IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
MF GO:0015399 primary active transmembrane transporter activity IEP Neighborhood
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
CC GO:0016459 myosin complex IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
MF GO:0022804 active transmembrane transporter activity IEP Neighborhood
BP GO:0023051 regulation of signaling IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030118 clathrin coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030125 clathrin vesicle coat IEP Neighborhood
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Neighborhood
CC GO:0030132 clathrin coat of coated pit IEP Neighborhood
BP GO:0032012 regulation of ARF protein signal transduction IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046578 regulation of Ras protein signal transduction IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
BP GO:1902531 regulation of intracellular signal transduction IEP Neighborhood
InterPro domains Description Start Stop
IPR004198 Znf_C5HC2 583 633
IPR003888 FYrich_N 1198 1245
IPR003349 JmjN 116 149
IPR003347 JmjC_dom 360 476
No external refs found!