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  5. AT5G17680

AT5G17680


Description : disease resistance protein (TIR-NBS-LRR class), putative


Gene families : OG0000061 (Archaeplastida) Phylogenetic Tree(s): OG0000061_tree ,
OG_05_0000077 (LandPlants) Phylogenetic Tree(s): OG_05_0000077_tree ,
OG_06_0000151 (SeedPlants) Phylogenetic Tree(s): OG_06_0000151_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G17680
Cluster HCCA: Cluster_220

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00250780 evm_27.TU.AmTr_v1... External stimuli response.biotic stress.pathogen... 0.02 Archaeplastida
AMTR_s00024p00233110 evm_27.TU.AmTr_v1... External stimuli response.biotic stress.pathogen... 0.03 Archaeplastida
AMTR_s00047p00138210 No alias TMV resistance protein N OS=Nicotiana glutinosa 0.03 Archaeplastida
AMTR_s00056p00219240 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AT1G27180 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.05 Archaeplastida
AT1G57650 No alias ATP binding 0.03 Archaeplastida
AT1G63870 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 Archaeplastida
AT1G66090 No alias Disease resistance protein (TIR-NBS class) 0.03 Archaeplastida
AT1G72890 No alias Disease resistance protein (TIR-NBS class) 0.03 Archaeplastida
AT3G04210 No alias Disease resistance protein (TIR-NBS class) 0.04 Archaeplastida
AT3G25505 No alias No description available 0.04 Archaeplastida
AT4G08450 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 Archaeplastida
AT4G16857 No alias No description available 0.05 Archaeplastida
AT4G16860 RPP4 Disease resistance protein (TIR-NBS-LRR class) family 0.03 Archaeplastida
AT4G16890 SNC1, BAL disease resistance protein (TIR-NBS-LRR class), putative 0.03 Archaeplastida
AT4G16920 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.05 Archaeplastida
AT4G16940 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 Archaeplastida
AT5G36930 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Archaeplastida
AT5G38340 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 Archaeplastida
AT5G38344 No alias Toll-Interleukin-Resistance (TIR) domain family protein 0.05 Archaeplastida
AT5G38350 No alias Disease resistance protein (NBS-LRR class) family 0.05 Archaeplastida
AT5G46450 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Archaeplastida
AT5G49140 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Archaeplastida
GSVIVT01025918001 No alias External stimuli response.biotic stress.pathogen... 0.02 Archaeplastida
Gb_20740 No alias effector receptor (NLR) 0.02 Archaeplastida
Solyc11g013750.3.1 No alias Disease resistance protein RPS4 OS=Arabidopsis thaliana... 0.02 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006952 defense response ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000726 non-recombinational repair IEP Neighborhood
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0003887 DNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0004003 ATP-dependent DNA helicase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0004402 histone acetyltransferase activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005677 chromatin silencing complex IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006289 nucleotide-excision repair IEP Neighborhood
BP GO:0006302 double-strand break repair IEP Neighborhood
BP GO:0006303 double-strand break repair via nonhomologous end joining IEP Neighborhood
BP GO:0006310 DNA recombination IEP Neighborhood
BP GO:0006312 mitotic recombination IEP Neighborhood
BP GO:0006349 regulation of gene expression by genetic imprinting IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
BP GO:0007059 chromosome segregation IEP Neighborhood
BP GO:0007131 reciprocal meiotic recombination IEP Neighborhood
BP GO:0007140 male meiotic nuclear division IEP Neighborhood
BP GO:0007143 female meiotic nuclear division IEP Neighborhood
MF GO:0008026 ATP-dependent helicase activity IEP Neighborhood
CC GO:0017053 transcriptional repressor complex IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
MF GO:0034212 peptide N-acetyltransferase activity IEP Neighborhood
BP GO:0035825 homologous recombination IEP Neighborhood
BP GO:0042138 meiotic DNA double-strand break formation IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
BP GO:0045132 meiotic chromosome segregation IEP Neighborhood
BP GO:0051026 chiasma assembly IEP Neighborhood
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Neighborhood
BP GO:0061982 meiosis I cell cycle process IEP Neighborhood
MF GO:0070035 purine NTP-dependent helicase activity IEP Neighborhood
BP GO:0071514 genetic imprinting IEP Neighborhood
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP Neighborhood
CC GO:0090568 nuclear transcriptional repressor complex IEP Neighborhood
BP GO:0098813 nuclear chromosome segregation IEP Neighborhood
BP GO:0140013 meiotic nuclear division IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
BP GO:1903046 meiotic cell cycle process IEP Neighborhood
InterPro domains Description Start Stop
IPR002182 NB-ARC 203 412
IPR000157 TIR_dom 19 178
IPR011713 Leu-rich_rpt_3 603 622
No external refs found!