1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_10434282g0010

MA_10434282g0010


Description : component TAF15 of TFIId basal transcription regulation complex


Gene families : OG0006677 (Archaeplastida) Phylogenetic Tree(s): OG0006677_tree ,
OG_05_0007121 (LandPlants) Phylogenetic Tree(s): OG_05_0007121_tree ,
OG_06_0007805 (SeedPlants) Phylogenetic Tree(s): OG_06_0007805_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10434282g0010
Cluster HCCA: Cluster_277

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00107550 evm_27.TU.AmTr_v1... RNA biosynthesis.RNA polymerase II-dependent... 0.02 Archaeplastida
Cpa|evm.model.tig00000194.52 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.01 Archaeplastida
Cre07.g328400 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.02 Archaeplastida
GSVIVT01010206001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.05 Archaeplastida
Gb_28670 No alias component TAF15 of TFIId basal transcription regulation complex 0.03 Archaeplastida
Pp3c17_960V3.1 No alias TBP-associated factor 15 0.03 Archaeplastida
Solyc11g040050.3.1 No alias component TAF15 of TFIId basal transcription regulation complex 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
MF GO:0016289 CoA hydrolase activity IEP Neighborhood
BP GO:0016458 gene silencing IEP Neighborhood
MF GO:0016790 thiolester hydrolase activity IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
BP GO:0031047 gene silencing by RNA IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000504 RRM_dom 68 145
IPR001876 Znf_RanBP2 206 235
IPR001876 Znf_RanBP2 274 300
No external refs found!