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Description : cohesin cofactor (PDS5)
Gene families : OG0000410 (Archaeplastida) Phylogenetic Tree(s): OG0000410_tree ,
OG_05_0022086 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0021483 (SeedPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: MA_10434304g0010 | |
| Cluster | HCCA: Cluster_407 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00065p00174980 | evm_27.TU.AmTr_v1... | Cell cycle.mitosis and meiosis.sister chromatid... | 0.03 | Archaeplastida | |
| AT1G15940 | No alias | Tudor/PWWP/MBT superfamily protein | 0.03 | Archaeplastida | |
| AT1G77600 | No alias | ARM repeat superfamily protein | 0.03 | Archaeplastida | |
| AT4G31880 | No alias | LOCATED IN: cytosol, chloroplast; EXPRESSED IN: 24 plant... | 0.03 | Archaeplastida | |
| AT5G47690 | No alias | binding | 0.04 | Archaeplastida | |
| GSVIVT01023587001 | No alias | Cell cycle.mitosis and meiosis.sister chromatid... | 0.03 | Archaeplastida | |
| GSVIVT01035890001 | No alias | Cell cycle.mitosis and meiosis.sister chromatid... | 0.05 | Archaeplastida | |
| Gb_02487 | No alias | cohesin cofactor (PDS5) | 0.02 | Archaeplastida | |
| Gb_09525 | No alias | cohesin cofactor (PDS5) | 0.03 | Archaeplastida | |
| Gb_23673 | No alias | cohesin cofactor (PDS5) | 0.04 | Archaeplastida | |
| LOC_Os06g17840.1 | No alias | cohesin cofactor (PDS5) | 0.04 | Archaeplastida | |
| Mp3g13850.1 | No alias | cohesin cofactor (PDS5) | 0.02 | Archaeplastida | |
| Pp3c10_24900V3.1 | No alias | binding | 0.03 | Archaeplastida | |
| Pp3c20_23000V3.1 | No alias | binding | 0.02 | Archaeplastida | |
| Pp3c23_10270V3.1 | No alias | binding | 0.03 | Archaeplastida | |
| Solyc06g065710.3.1 | No alias | cohesin cofactor (PDS5) | 0.03 | Archaeplastida | |
| Solyc11g012770.2.1 | No alias | cohesin cofactor (PDS5) | 0.05 | Archaeplastida | |
| Zm00001e015094_P002 | No alias | cohesin cofactor (PDS5) | 0.03 | Archaeplastida | |
| Zm00001e030989_P001 | No alias | cohesin cofactor (PDS5) | 0.04 | Archaeplastida | |
| Zm00001e036853_P003 | No alias | cohesin cofactor (PDS5) | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003684 | damaged DNA binding | IEP | Neighborhood |
| MF | GO:0003723 | RNA binding | IEP | Neighborhood |
| MF | GO:0003779 | actin binding | IEP | Neighborhood |
| BP | GO:0006259 | DNA metabolic process | IEP | Neighborhood |
| BP | GO:0006281 | DNA repair | IEP | Neighborhood |
| BP | GO:0006886 | intracellular protein transport | IEP | Neighborhood |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Neighborhood |
| BP | GO:0008104 | protein localization | IEP | Neighborhood |
| BP | GO:0010921 | regulation of phosphatase activity | IEP | Neighborhood |
| BP | GO:0015031 | protein transport | IEP | Neighborhood |
| BP | GO:0015833 | peptide transport | IEP | Neighborhood |
| BP | GO:0016192 | vesicle-mediated transport | IEP | Neighborhood |
| BP | GO:0019220 | regulation of phosphate metabolic process | IEP | Neighborhood |
| MF | GO:0019239 | deaminase activity | IEP | Neighborhood |
| MF | GO:0019902 | phosphatase binding | IEP | Neighborhood |
| MF | GO:0019903 | protein phosphatase binding | IEP | Neighborhood |
| CC | GO:0030117 | membrane coat | IEP | Neighborhood |
| BP | GO:0031399 | regulation of protein modification process | IEP | Neighborhood |
| BP | GO:0032268 | regulation of cellular protein metabolic process | IEP | Neighborhood |
| BP | GO:0033036 | macromolecule localization | IEP | Neighborhood |
| BP | GO:0033554 | cellular response to stress | IEP | Neighborhood |
| BP | GO:0035303 | regulation of dephosphorylation | IEP | Neighborhood |
| BP | GO:0035304 | regulation of protein dephosphorylation | IEP | Neighborhood |
| BP | GO:0042886 | amide transport | IEP | Neighborhood |
| BP | GO:0043666 | regulation of phosphoprotein phosphatase activity | IEP | Neighborhood |
| BP | GO:0045184 | establishment of protein localization | IEP | Neighborhood |
| BP | GO:0046907 | intracellular transport | IEP | Neighborhood |
| BP | GO:0050790 | regulation of catalytic activity | IEP | Neighborhood |
| BP | GO:0051174 | regulation of phosphorus metabolic process | IEP | Neighborhood |
| BP | GO:0051246 | regulation of protein metabolic process | IEP | Neighborhood |
| BP | GO:0051336 | regulation of hydrolase activity | IEP | Neighborhood |
| BP | GO:0051641 | cellular localization | IEP | Neighborhood |
| BP | GO:0051649 | establishment of localization in cell | IEP | Neighborhood |
| BP | GO:0051716 | cellular response to stimulus | IEP | Neighborhood |
| BP | GO:0065009 | regulation of molecular function | IEP | Neighborhood |
| BP | GO:0071702 | organic substance transport | IEP | Neighborhood |
| BP | GO:0071705 | nitrogen compound transport | IEP | Neighborhood |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
| CC | GO:0098796 | membrane protein complex | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |