AT5G17800 (MYB56, AtMYB56)


Aliases : MYB56, AtMYB56

Description : myb domain protein 56


Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000116 (LandPlants) Phylogenetic Tree(s): OG_05_0000116_tree ,
OG_06_0000572 (SeedPlants) Phylogenetic Tree(s): OG_06_0000572_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G17800
Cluster HCCA: Cluster_263

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272410 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AMTR_s00003p00219710 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00006p00225600 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
AMTR_s00007p00169630 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AMTR_s00024p00224470 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00032p00057800 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00032p00221670 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00044p00189590 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00079p00140660 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00096p00076220 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00105p00029600 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AT1G26780 AtMYB117, LOF1, MYB117 myb domain protein 117 0.03 Archaeplastida
AT1G57560 AtMYB50, MYB50 myb domain protein 50 0.03 Archaeplastida
AT1G66230 AtMYB20, MYB20 myb domain protein 20 0.03 Archaeplastida
AT3G12820 MYB10, AtMYB10 myb domain protein 10 0.03 Archaeplastida
AT3G50060 MYB77 myb domain protein 77 0.03 Archaeplastida
AT4G05100 AtMYB74, MYB74 myb domain protein 74 0.03 Archaeplastida
AT4G13480 AtMYB79, MYB79 myb domain protein 79 0.04 Archaeplastida
AT5G40330 ATMYBRTF, ATMYB23, MYB23 myb domain protein 23 0.02 Archaeplastida
GSVIVT01008005001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01008303001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01012778001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01015575001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01025034001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01028981001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01029145001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01034943001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01036712001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01036802001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Gb_00379 No alias transcription factor (MYB) 0.04 Archaeplastida
Gb_03227 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_09998 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_11232 No alias transcription factor (MYB) 0.04 Archaeplastida
Gb_19348 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_22239 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_24073 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_29789 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_33428 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_34882 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_35820 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os01g45090.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os01g52410.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os01g74590.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os02g09480.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os02g36890.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os02g40530.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os02g54520.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os03g20090.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os07g31470.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os07g44090.3 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os07g48870.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os08g33940.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os09g23620.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os10g33810.1 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_10157944g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_10217366g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10431212g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_117992g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_121533g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_15502g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_15687g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_190973g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_246817g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_437179g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
Mp1g17210.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Mp1g24520.1 No alias component SNAPC4 of SNAP snRNA transcription factor... 0.02 Archaeplastida
Mp5g14610.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Pp3c14_12390V3.1 No alias myb domain protein 103 0.02 Archaeplastida
Pp3c15_7790V3.1 No alias myb domain protein 55 0.02 Archaeplastida
Pp3c1_1650V3.1 No alias myb domain protein 105 0.02 Archaeplastida
Pp3c1_21610V3.1 No alias myb domain protein 103 0.04 Archaeplastida
Pp3c25_3170V3.1 No alias myb domain protein 16 0.03 Archaeplastida
Pp3c6_9970V3.1 No alias myb domain protein 106 0.02 Archaeplastida
Solyc01g079620.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc01g094360.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc02g079280.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc02g089190.2.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc02g092930.1.1 No alias transcription factor (MYB) 0.07 Archaeplastida
Solyc03g005570.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc03g093890.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc04g056310.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc04g077260.3.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc05g007710.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc05g014290.4.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc05g052850.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc05g053150.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc07g006750.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc07g054840.4.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc08g076700.1.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc08g076710.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc09g008250.4.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc09g011780.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc09g090790.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc10g005460.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc10g008700.3.1 No alias No annotation 0.04 Archaeplastida
Solyc12g005640.2.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc12g099130.2.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e001492_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e001803_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e004128_P003 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e004568_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e013910_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e016583_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e020754_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e026250_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e028653_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e029600_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e030961_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e034072_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e035233_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e035619_P002 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e035993_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e040384_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e041239_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e041535_P001 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of transcription, DNA-templated TAS Interproscan
Type GO Term Name Evidence Source
BP GO:0000103 sulfate assimilation IEP Neighborhood
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
MF GO:0004364 glutathione transferase activity IEP Neighborhood
MF GO:0004396 hexokinase activity IEP Neighborhood
MF GO:0004623 phospholipase A2 activity IEP Neighborhood
CC GO:0005615 extracellular space IEP Neighborhood
CC GO:0005794 Golgi apparatus IEP Neighborhood
CC GO:0005911 cell-cell junction IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0007140 male meiotic nuclear division IEP Neighborhood
BP GO:0007143 female meiotic nuclear division IEP Neighborhood
MF GO:0008022 protein C-terminus binding IEP Neighborhood
MF GO:0008083 growth factor activity IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009061 anaerobic respiration IEP Neighborhood
BP GO:0009404 toxin metabolic process IEP Neighborhood
BP GO:0009407 toxin catabolic process IEP Neighborhood
CC GO:0009505 plant-type cell wall IEP Neighborhood
CC GO:0009506 plasmodesma IEP Neighborhood
BP GO:0009611 response to wounding IEP Neighborhood
BP GO:0009692 ethylene metabolic process IEP Neighborhood
BP GO:0009693 ethylene biosynthetic process IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0009751 response to salicylic acid IEP Neighborhood
BP GO:0009873 ethylene-activated signaling pathway IEP Neighborhood
BP GO:0009961 response to 1-aminocyclopropane-1-carboxylic acid IEP Neighborhood
MF GO:0009973 adenylyl-sulfate reductase activity IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0010165 response to X-ray IEP Neighborhood
BP GO:0010200 response to chitin IEP Neighborhood
BP GO:0010243 response to organonitrogen compound IEP Neighborhood
BP GO:0010540 basipetal auxin transport IEP Neighborhood
BP GO:0010583 response to cyclopentenone IEP Neighborhood
BP GO:0014070 response to organic cyclic compound IEP Neighborhood
MF GO:0016298 lipase activity IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016629 12-oxophytodienoate reductase activity IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
BP GO:0019748 secondary metabolic process IEP Neighborhood
BP GO:0022622 root system development IEP Neighborhood
MF GO:0022821 potassium ion antiporter activity IEP Neighborhood
CC GO:0030054 cell junction IEP Neighborhood
MF GO:0030545 receptor regulator activity IEP Neighborhood
CC GO:0031306 intrinsic component of mitochondrial outer membrane IEP Neighborhood
CC GO:0031307 integral component of mitochondrial outer membrane IEP Neighborhood
CC GO:0032592 integral component of mitochondrial membrane IEP Neighborhood
BP GO:0033993 response to lipid IEP Neighborhood
MF GO:0042171 lysophosphatidic acid acyltransferase activity IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
BP GO:0042493 response to drug IEP Neighborhood
BP GO:0043200 response to amino acid IEP Neighborhood
BP GO:0043449 cellular alkene metabolic process IEP Neighborhood
BP GO:0043450 alkene biosynthetic process IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0046677 response to antibiotic IEP Neighborhood
MF GO:0048018 receptor ligand activity IEP Neighborhood
BP GO:0048364 root development IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051865 protein autoubiquitination IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0055081 anion homeostasis IEP Neighborhood
BP GO:0055088 lipid homeostasis IEP Neighborhood
BP GO:0055089 fatty acid homeostasis IEP Neighborhood
BP GO:0055090 acylglycerol homeostasis IEP Neighborhood
BP GO:0055091 phospholipid homeostasis IEP Neighborhood
BP GO:0070328 triglyceride homeostasis IEP Neighborhood
MF GO:0071617 lysophospholipid acyltransferase activity IEP Neighborhood
MF GO:0080043 quercetin 3-O-glucosyltransferase activity IEP Neighborhood
BP GO:0080050 regulation of seed development IEP Neighborhood
BP GO:0090333 regulation of stomatal closure IEP Neighborhood
CC GO:0098573 intrinsic component of mitochondrial membrane IEP Neighborhood
BP GO:0098754 detoxification IEP Neighborhood
BP GO:0140013 meiotic nuclear division IEP Neighborhood
BP GO:1900673 olefin metabolic process IEP Neighborhood
BP GO:1900674 olefin biosynthetic process IEP Neighborhood
BP GO:1901698 response to nitrogen compound IEP Neighborhood
BP GO:1901700 response to oxygen-containing compound IEP Neighborhood
BP GO:2000034 regulation of seed maturation IEP Neighborhood
BP GO:2000693 positive regulation of seed maturation IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 93 138
IPR001005 SANT/Myb 145 188
No external refs found!