MA_10434339g0010


Description : MADS-box protein GGM13 OS=Gnetum gnemon (sp|q9xgj4|ggm13_gnegn : 216.0)


Gene families : OG0000011 (Archaeplastida) Phylogenetic Tree(s): OG0000011_tree ,
OG_05_0000008 (LandPlants) Phylogenetic Tree(s): OG_05_0000008_tree ,
OG_06_0000013 (SeedPlants) Phylogenetic Tree(s): OG_06_0000013_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10434339g0010
Cluster HCCA: Cluster_682

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00218870 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MADS box... 0.02 Archaeplastida
AMTR_s00002p00262760 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00010p00214260 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MADS box... 0.02 Archaeplastida
AMTR_s00071p00193200 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MADS box... 0.04 Archaeplastida
AMTR_s00071p00198970 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MADS box... 0.02 Archaeplastida
AMTR_s00140p00045380 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MADS box... 0.01 Archaeplastida
AT1G17310 No alias MADS-box transcription factor family protein 0.03 Archaeplastida
AT1G24260 AGL9, SEP3 K-box region and MADS-box transcription factor family protein 0.03 Archaeplastida
AT1G69120 AGL7, AP1 K-box region and MADS-box transcription factor family protein 0.03 Archaeplastida
AT1G71692 XAL1, AGL12 AGAMOUS-like 12 0.04 Archaeplastida
AT1G77950 AGL67 AGAMOUS-like 67 0.03 Archaeplastida
AT2G22630 AGL17 AGAMOUS-like 17 0.02 Archaeplastida
AT2G42830 SHP2, AGL5 K-box region and MADS-box transcription factor family protein 0.04 Archaeplastida
AT2G45650 AGL6 AGAMOUS-like 6 0.03 Archaeplastida
AT3G02310 AGL4, SEP2 K-box region and MADS-box transcription factor family protein 0.02 Archaeplastida
AT3G54340 AP3, ATAP3 K-box region and MADS-box transcription factor family protein 0.04 Archaeplastida
AT3G58780 AGL1, SHP1 K-box region and MADS-box transcription factor family protein 0.02 Archaeplastida
AT4G09960 STK, AGL11 K-box region and MADS-box transcription factor family protein 0.03 Archaeplastida
AT4G11880 AGL14 AGAMOUS-like 14 0.03 Archaeplastida
AT4G18960 AG K-box region and MADS-box transcription factor family protein 0.03 Archaeplastida
AT5G20240 PI K-box region and MADS-box transcription factor family protein 0.03 Archaeplastida
AT5G60440 AGL62 AGAMOUS-like 62 0.02 Archaeplastida
GSVIVT01008139001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.03 Archaeplastida
GSVIVT01008560001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.03 Archaeplastida
GSVIVT01008806001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.04 Archaeplastida
GSVIVT01009815001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.02 Archaeplastida
GSVIVT01012110001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.04 Archaeplastida
GSVIVT01014093001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.03 Archaeplastida
GSVIVT01019883001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.02 Archaeplastida
GSVIVT01025945001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.05 Archaeplastida
GSVIVT01026207001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.05 Archaeplastida
GSVIVT01033253001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.01 Archaeplastida
GSVIVT01035477001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.03 Archaeplastida
Gb_03068 No alias transcription factor (MADS/AGL) 0.06 Archaeplastida
Gb_12586 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
Gb_16301 No alias transcription factor (MADS/AGL) 0.04 Archaeplastida
Gb_28337 No alias MADS-box transcription factor 6 OS=Oryza sativa subsp.... 0.03 Archaeplastida
LOC_Os01g10504.1 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
LOC_Os01g66290.1 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
LOC_Os02g45770.1 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
LOC_Os03g11614.1 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
LOC_Os03g54170.1 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
LOC_Os05g11414.1 No alias transcription factor (MADS/AGL) 0.05 Archaeplastida
LOC_Os05g34940.1 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
LOC_Os06g23980.1 No alias MADS-box transcription factor 27 OS=Oryza sativa subsp.... 0.05 Archaeplastida
LOC_Os08g41950.1 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
LOC_Os09g32948.1 No alias transcription factor (MADS/AGL) 0.05 Archaeplastida
LOC_Os12g31748.2 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
MA_175522g0010 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
MA_25342g0010 No alias transcription factor (MADS/AGL) 0.04 Archaeplastida
MA_502016g0010 No alias MADS-box protein GGM13 OS=Gnetum gnemon... 0.01 Archaeplastida
MA_9382435g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c17_13070V3.1 No alias AGAMOUS-like 66 0.02 Archaeplastida
Smo113962 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.03 Archaeplastida
Smo121275 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.03 Archaeplastida
Smo5960 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.03 Archaeplastida
Smo69980 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.03 Archaeplastida
Solyc01g080785.1.1 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
Solyc01g093960.3.1 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Solyc01g106710.1.1 No alias component MED19 of head module of MEDIATOR transcription... 0.06 Archaeplastida
Solyc02g089210.4.1 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Solyc02g091550.2.1 No alias transcription factor (MADS/AGL) 0.04 Archaeplastida
Solyc04g005320.3.1 No alias transcription factor (MADS/AGL) 0.05 Archaeplastida
Solyc05g012020.4.1 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Solyc06g069430.3.1 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Solyc10g044965.1.1 No alias transcription factor (MADS/AGL) 0.05 Archaeplastida
Solyc10g080030.2.1 No alias transcription factor (MADS/AGL) 0.04 Archaeplastida
Solyc11g005120.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc11g032100.2.1 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Solyc12g056460.3.1 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
Zm00001e000846_P003 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
Zm00001e003667_P001 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Zm00001e006950_P001 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Zm00001e010125_P001 No alias transcription factor (MADS/AGL) 0.04 Archaeplastida
Zm00001e012024_P001 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
Zm00001e016529_P004 No alias transcription factor (MADS/AGL) 0.04 Archaeplastida
Zm00001e019057_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e026007_P004 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e030373_P001 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Zm00001e031267_P003 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Zm00001e034629_P001 No alias transcription factor (MADS/AGL) 0.05 Archaeplastida
Zm00001e038716_P004 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
Zm00001e039774_P001 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003713 transcription coactivator activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0005102 signaling receptor binding IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
MF GO:0008083 growth factor activity IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
BP GO:0008283 cell proliferation IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
MF GO:0030545 receptor regulator activity IEP Neighborhood
MF GO:0048018 receptor ligand activity IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
InterPro domains Description Start Stop
IPR002487 TF_Kbox 20 103
No external refs found!