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  5. MA_10434350g0010

MA_10434350g0010


Description : RS31/40/41 RNA splicing factor


Gene families : OG0001617 (Archaeplastida) Phylogenetic Tree(s): OG0001617_tree ,
OG_05_0001638 (LandPlants) Phylogenetic Tree(s): OG_05_0001638_tree ,
OG_06_0001180 (SeedPlants) Phylogenetic Tree(s): OG_06_0001180_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10434350g0010
Cluster HCCA: Cluster_372

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000852.9 No alias RNA processing.RNA splicing.spliceosome-associated... 0.01 Archaeplastida
MA_10436130g0020 No alias RS31/40/41 RNA splicing factor 0.04 Archaeplastida
Solyc10g009330.3.1 No alias RS31/40/41 RNA splicing factor 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Neighborhood
MF GO:0001671 ATPase activator activity IEP Neighborhood
MF GO:0004298 threonine-type endopeptidase activity IEP Neighborhood
CC GO:0005739 mitochondrion IEP Neighborhood
CC GO:0005839 proteasome core complex IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
BP GO:0016052 carbohydrate catabolic process IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016161 beta-amylase activity IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
MF GO:0060590 ATPase regulator activity IEP Neighborhood
MF GO:0070003 threonine-type peptidase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR000504 RRM_dom 3 31
IPR000504 RRM_dom 66 128
No external refs found!