MA_10434458g0010


Description : ligand-gated cation channel (GLR)


Gene families : OG0000085 (Archaeplastida) Phylogenetic Tree(s): OG0000085_tree ,
OG_05_0000436 (LandPlants) Phylogenetic Tree(s): OG_05_0000436_tree ,
OG_06_0000332 (SeedPlants) Phylogenetic Tree(s): OG_06_0000332_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10434458g0010
Cluster HCCA: Cluster_425

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00182190 evm_27.TU.AmTr_v1... Solute transport.channels.GLR ligand-gated cation channel 0.02 Archaeplastida
Gb_16317 No alias ligand-gated cation channel (GLR) 0.02 Archaeplastida
Gb_41411 No alias ligand-gated cation channel (GLR) 0.04 Archaeplastida
Smo92810 No alias Solute transport.channels.GLR ligand-gated cation channel 0.02 Archaeplastida
Zm00001e007127_P002 No alias ligand-gated cation channel (GLR) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004970 ionotropic glutamate receptor activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
InterPro domains Description Start Stop
IPR019594 Glu/Gly-bd 462 547
IPR001828 ANF_lig-bd_rcpt 28 386
No external refs found!