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  5. MA_10434493g0010

MA_10434493g0010


Description : TRAF1 endomembrane trafficking ATG6-stability regulator protein


Gene families : OG0001944 (Archaeplastida) Phylogenetic Tree(s): OG0001944_tree ,
OG_05_0002285 (LandPlants) Phylogenetic Tree(s): OG_05_0002285_tree ,
OG_06_0002760 (SeedPlants) Phylogenetic Tree(s): OG_06_0002760_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10434493g0010
Cluster HCCA: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01018133001 No alias Vesicle trafficking.endomembrane trafficking.PI3-kinase... 0.04 Archaeplastida
LOC_Os05g43280.1 No alias TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.02 Archaeplastida
LOC_Os12g40520.1 No alias TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.03 Archaeplastida
Mp8g14880.1 No alias TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.03 Archaeplastida
Pp3c12_900V3.1 No alias TRAF-like superfamily protein 0.06 Archaeplastida
Pp3c17_710V3.1 No alias TRAF-like superfamily protein 0.06 Archaeplastida
Solyc03g005430.4.1 No alias TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.02 Archaeplastida
Solyc09g089560.4.1 No alias TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.03 Archaeplastida
Zm00001e003140_P001 No alias TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.06 Archaeplastida
Zm00001e019653_P002 No alias TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.04 Archaeplastida
Zm00001e027387_P004 No alias TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.07 Archaeplastida
Zm00001e032087_P004 No alias TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
CC GO:0005643 nuclear pore IEP Neighborhood
MF GO:0017056 structural constituent of nuclear pore IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
InterPro domains Description Start Stop
IPR002083 MATH/TRAF_dom 121 238
No external refs found!