AT5G18410 (SRA1, KLK, PIR,...)


Aliases : SRA1, KLK, PIR, ATSRA1, PIRP, PIR121

Description : transcription activators


Gene families : OG0003345 (Archaeplastida) Phylogenetic Tree(s): OG0003345_tree ,
OG_05_0003636 (LandPlants) Phylogenetic Tree(s): OG_05_0003636_tree ,
OG_06_0003898 (SeedPlants) Phylogenetic Tree(s): OG_06_0003898_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G18410
Cluster HCCA: Cluster_240

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01026355001 No alias Cytoskeleton.microfilament network.actin... 0.09 Archaeplastida
Gb_18362 No alias Protein PIR OS=Arabidopsis thaliana (sp|q5s2c3|pir_arath : 154.0) 0.05 Archaeplastida
Gb_18363 No alias Protein PIR OS=Arabidopsis thaliana (sp|q5s2c3|pir_arath : 127.0) 0.04 Archaeplastida
Gb_18365 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_18366 No alias Protein PIR OS=Arabidopsis thaliana (sp|q5s2c3|pir_arath : 156.0) 0.04 Archaeplastida
LOC_Os03g05020.1 No alias component PIROGI of SCAR/WAVE ARP2/3-activating complex 0.09 Archaeplastida
MA_10428347g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_10436695g0010 No alias component PIROGI of SCAR/WAVE ARP2/3-activating complex 0.03 Archaeplastida
MA_10437238g0010 No alias Protein PIR OS=Arabidopsis thaliana (sp|q5s2c3|pir_arath : 211.0) 0.08 Archaeplastida
Pp3c21_8020V3.1 No alias transcription activators 0.02 Archaeplastida
Smo160351 No alias Cytoskeleton.microfilament network.actin... 0.02 Archaeplastida
Zm00001e000353_P001 No alias component PIROGI of SCAR/WAVE ARP2/3-activating complex 0.13 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization RCA Interproscan
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0006342 chromatin silencing RCA Interproscan
BP GO:0007020 microtubule nucleation RCA Interproscan
BP GO:0009860 pollen tube growth RCA Interproscan
BP GO:0009965 leaf morphogenesis RCA Interproscan
BP GO:0010090 trichome morphogenesis IMP Interproscan
BP GO:0016572 histone phosphorylation RCA Interproscan
BP GO:0030036 actin cytoskeleton organization IMP Interproscan
CC GO:0031209 SCAR complex TAS Interproscan
BP GO:0045010 actin nucleation RCA Interproscan
BP GO:0045010 actin nucleation TAS Interproscan
BP GO:0051225 spindle assembly RCA Interproscan
BP GO:0051258 protein polymerization RCA Interproscan
BP GO:0051567 histone H3-K9 methylation RCA Interproscan
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Neighborhood
BP GO:0000097 sulfur amino acid biosynthetic process IEP Neighborhood
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Neighborhood
CC GO:0000159 protein phosphatase type 2A complex IEP Neighborhood
MF GO:0000166 nucleotide binding IEP Neighborhood
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP Neighborhood
BP GO:0000911 cytokinesis by cell plate formation IEP Neighborhood
BP GO:0001578 microtubule bundle formation IEP Neighborhood
BP GO:0002252 immune effector process IEP Neighborhood
BP GO:0002376 immune system process IEP Neighborhood
BP GO:0003002 regionalization IEP Neighborhood
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0003777 microtubule motor activity IEP Neighborhood
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Neighborhood
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0004402 histone acetyltransferase activity IEP Neighborhood
MF GO:0004561 alpha-N-acetylglucosaminidase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004674 protein serine/threonine kinase activity IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
CC GO:0005768 endosome IEP Neighborhood
CC GO:0005773 vacuole IEP Neighborhood
CC GO:0005794 Golgi apparatus IEP Neighborhood
CC GO:0005798 Golgi-associated vesicle IEP Neighborhood
CC GO:0005802 trans-Golgi network IEP Neighborhood
CC GO:0005874 microtubule IEP Neighborhood
CC GO:0005881 cytoplasmic microtubule IEP Neighborhood
CC GO:0005886 plasma membrane IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Neighborhood
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Neighborhood
BP GO:0006084 acetyl-CoA metabolic process IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006475 internal protein amino acid acetylation IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0006521 regulation of cellular amino acid metabolic process IEP Neighborhood
BP GO:0006555 methionine metabolic process IEP Neighborhood
BP GO:0006637 acyl-CoA metabolic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
BP GO:0006955 immune response IEP Neighborhood
BP GO:0007049 cell cycle IEP Neighborhood
BP GO:0007154 cell communication IEP Neighborhood
BP GO:0007155 cell adhesion IEP Neighborhood
BP GO:0007166 cell surface receptor signaling pathway IEP Neighborhood
BP GO:0007167 enzyme linked receptor protein signaling pathway IEP Neighborhood
BP GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway IEP Neighborhood
BP GO:0007267 cell-cell signaling IEP Neighborhood
BP GO:0007389 pattern specification process IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
BP GO:0008037 cell recognition IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0008158 hedgehog receptor activity IEP Neighborhood
MF GO:0008187 poly-pyrimidine tract binding IEP Neighborhood
MF GO:0008266 poly(U) RNA binding IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
BP GO:0008652 cellular amino acid biosynthetic process IEP Neighborhood
BP GO:0009066 aspartate family amino acid metabolic process IEP Neighborhood
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Neighborhood
BP GO:0009086 methionine biosynthetic process IEP Neighborhood
BP GO:0009411 response to UV IEP Neighborhood
CC GO:0009574 preprophase band IEP Neighborhood
BP GO:0009605 response to external stimulus IEP Neighborhood
BP GO:0009615 response to virus IEP Neighborhood
BP GO:0009616 virus induced gene silencing IEP Neighborhood
BP GO:0009664 plant-type cell wall organization IEP Neighborhood
BP GO:0009789 positive regulation of abscisic acid-activated signaling pathway IEP Neighborhood
BP GO:0009791 post-embryonic development IEP Neighborhood
BP GO:0009799 specification of symmetry IEP Neighborhood
BP GO:0009825 multidimensional cell growth IEP Neighborhood
BP GO:0009832 plant-type cell wall biogenesis IEP Neighborhood
BP GO:0009855 determination of bilateral symmetry IEP Neighborhood
BP GO:0009887 animal organ morphogenesis IEP Neighborhood
BP GO:0009914 hormone transport IEP Neighborhood
BP GO:0009926 auxin polar transport IEP Neighborhood
BP GO:0009934 regulation of meristem structural organization IEP Neighborhood
BP GO:0009956 radial pattern formation IEP Neighborhood
CC GO:0010005 cortical microtubule, transverse to long axis IEP Neighborhood
BP GO:0010014 meristem initiation IEP Neighborhood
BP GO:0010016 shoot system morphogenesis IEP Neighborhood
BP GO:0010031 circumnutation IEP Neighborhood
BP GO:0010051 xylem and phloem pattern formation IEP Neighborhood
BP GO:0010065 primary meristem tissue development IEP Neighborhood
BP GO:0010068 protoderm histogenesis IEP Neighborhood
BP GO:0010073 meristem maintenance IEP Neighborhood
BP GO:0010075 regulation of meristem growth IEP Neighborhood
BP GO:0010160 formation of animal organ boundary IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
BP GO:0010267 production of ta-siRNAs involved in RNA interference IEP Neighborhood
MF GO:0010329 auxin efflux transmembrane transporter activity IEP Neighborhood
BP GO:0010364 regulation of ethylene biosynthetic process IEP Neighborhood
MF GO:0010385 double-stranded methylated DNA binding IEP Neighborhood
BP GO:0010480 microsporocyte differentiation IEP Neighborhood
BP GO:0010540 basipetal auxin transport IEP Neighborhood
BP GO:0010541 acropetal auxin transport IEP Neighborhood
BP GO:0010608 posttranscriptional regulation of gene expression IEP Neighborhood
BP GO:0010639 negative regulation of organelle organization IEP Neighborhood
BP GO:0010817 regulation of hormone levels IEP Neighborhood
MF GO:0015562 efflux transmembrane transporter activity IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
MF GO:0015929 hexosaminidase activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016208 AMP binding IEP Neighborhood
BP GO:0016246 RNA interference IEP Neighborhood
BP GO:0016441 posttranscriptional gene silencing IEP Neighborhood
BP GO:0016573 histone acetylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
BP GO:0018393 internal peptidyl-lysine acetylation IEP Neighborhood
BP GO:0018394 peptidyl-lysine acetylation IEP Neighborhood
BP GO:0022403 cell cycle phase IEP Neighborhood
BP GO:0022603 regulation of anatomical structure morphogenesis IEP Neighborhood
BP GO:0022610 biological adhesion IEP Neighborhood
BP GO:0023052 signaling IEP Neighborhood
CC GO:0030133 transport vesicle IEP Neighborhood
CC GO:0030135 coated vesicle IEP Neighborhood
CC GO:0030136 clathrin-coated vesicle IEP Neighborhood
CC GO:0030140 trans-Golgi network transport vesicle IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
BP GO:0030422 production of siRNA involved in RNA interference IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
BP GO:0030834 regulation of actin filament depolymerization IEP Neighborhood
BP GO:0030835 negative regulation of actin filament depolymerization IEP Neighborhood
BP GO:0030837 negative regulation of actin filament polymerization IEP Neighborhood
BP GO:0031047 gene silencing by RNA IEP Neighborhood
BP GO:0031050 dsRNA fragmentation IEP Neighborhood
BP GO:0031109 microtubule polymerization or depolymerization IEP Neighborhood
BP GO:0031110 regulation of microtubule polymerization or depolymerization IEP Neighborhood
BP GO:0031112 positive regulation of microtubule polymerization or depolymerization IEP Neighborhood
BP GO:0031113 regulation of microtubule polymerization IEP Neighborhood
BP GO:0031116 positive regulation of microtubule polymerization IEP Neighborhood
BP GO:0031122 cytoplasmic microtubule organization IEP Neighborhood
BP GO:0031333 negative regulation of protein complex assembly IEP Neighborhood
BP GO:0031335 regulation of sulfur amino acid metabolic process IEP Neighborhood
CC GO:0031410 cytoplasmic vesicle IEP Neighborhood
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Neighborhood
CC GO:0031982 vesicle IEP Neighborhood
CC GO:0031984 organelle subcompartment IEP Neighborhood
BP GO:0032272 negative regulation of protein polymerization IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032506 cytokinetic process IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0032886 regulation of microtubule-based process IEP Neighborhood
BP GO:0033238 regulation of cellular amine metabolic process IEP Neighborhood
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Neighborhood
MF GO:0034212 peptide N-acetyltransferase activity IEP Neighborhood
MF GO:0035091 phosphatidylinositol binding IEP Neighborhood
BP GO:0035194 posttranscriptional gene silencing by RNA IEP Neighborhood
BP GO:0035196 production of miRNAs involved in gene silencing by miRNA IEP Neighborhood
BP GO:0035383 thioester metabolic process IEP Neighborhood
BP GO:0035821 modification of morphology or physiology of other organism IEP Neighborhood
BP GO:0040008 regulation of growth IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0042546 cell wall biogenesis IEP Neighborhood
BP GO:0042762 regulation of sulfur metabolic process IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043242 negative regulation of protein complex disassembly IEP Neighborhood
BP GO:0043244 regulation of protein complex disassembly IEP Neighborhood
BP GO:0043473 pigmentation IEP Neighborhood
BP GO:0043476 pigment accumulation IEP Neighborhood
BP GO:0043478 pigment accumulation in response to UV light IEP Neighborhood
BP GO:0043479 pigment accumulation in tissues in response to UV light IEP Neighborhood
BP GO:0043480 pigment accumulation in tissues IEP Neighborhood
BP GO:0043481 anthocyanin accumulation in tissues in response to UV light IEP Neighborhood
BP GO:0043622 cortical microtubule organization IEP Neighborhood
BP GO:0043966 histone H3 acetylation IEP Neighborhood
BP GO:0043971 histone H3-K18 acetylation IEP Neighborhood
BP GO:0043972 histone H3-K23 acetylation IEP Neighborhood
BP GO:0044003 modification by symbiont of host morphology or physiology IEP Neighborhood
BP GO:0044030 regulation of DNA methylation IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
BP GO:0044154 histone H3-K14 acetylation IEP Neighborhood
BP GO:0044272 sulfur compound biosynthetic process IEP Neighborhood
BP GO:0044419 interspecies interaction between organisms IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0044848 biological phase IEP Neighborhood
BP GO:0045087 innate immune response IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
BP GO:0045926 negative regulation of growth IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
BP GO:0046777 protein autophosphorylation IEP Neighborhood
BP GO:0046785 microtubule polymerization IEP Neighborhood
BP GO:0046885 regulation of hormone biosynthetic process IEP Neighborhood
BP GO:0048437 floral organ development IEP Neighborhood
BP GO:0048439 flower morphogenesis IEP Neighborhood
BP GO:0048440 carpel development IEP Neighborhood
BP GO:0048467 gynoecium development IEP Neighborhood
BP GO:0048469 cell maturation IEP Neighborhood
BP GO:0048508 embryonic meristem development IEP Neighborhood
BP GO:0048509 regulation of meristem development IEP Neighborhood
BP GO:0048528 post-embryonic root development IEP Neighborhood
BP GO:0048533 sporocyte differentiation IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood
BP GO:0048638 regulation of developmental growth IEP Neighborhood
BP GO:0048645 animal organ formation IEP Neighborhood
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP Neighborhood
BP GO:0048764 trichoblast maturation IEP Neighborhood
BP GO:0048765 root hair cell differentiation IEP Neighborhood
BP GO:0048767 root hair elongation IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
BP GO:0048859 formation of anatomical boundary IEP Neighborhood
BP GO:0050793 regulation of developmental process IEP Neighborhood
BP GO:0050879 multicellular organismal movement IEP Neighborhood
MF GO:0051015 actin filament binding IEP Neighborhood
BP GO:0051016 barbed-end actin filament capping IEP Neighborhood
BP GO:0051125 regulation of actin nucleation IEP Neighborhood
BP GO:0051127 positive regulation of actin nucleation IEP Neighborhood
BP GO:0051129 negative regulation of cellular component organization IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
BP GO:0051322 anaphase IEP Neighborhood
BP GO:0051494 negative regulation of cytoskeleton organization IEP Neighborhood
BP GO:0051513 regulation of monopolar cell growth IEP Neighborhood
BP GO:0051607 defense response to virus IEP Neighborhood
BP GO:0051693 actin filament capping IEP Neighborhood
BP GO:0051701 interaction with host IEP Neighborhood
BP GO:0051817 modification of morphology or physiology of other organism involved in symbiotic interaction IEP Neighborhood
BP GO:0052018 modulation by symbiont of RNA levels in host IEP Neighborhood
BP GO:0052249 modulation of RNA levels in other organism involved in symbiotic interaction IEP Neighborhood
CC GO:0055028 cortical microtubule IEP Neighborhood
BP GO:0060918 auxin transport IEP Neighborhood
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Neighborhood
BP GO:0070507 regulation of microtubule cytoskeleton organization IEP Neighborhood
BP GO:0070918 production of small RNA involved in gene silencing by RNA IEP Neighborhood
CC GO:0070971 endoplasmic reticulum exit site IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Neighborhood
CC GO:0072686 mitotic spindle IEP Neighborhood
CC GO:0080008 Cul4-RING E3 ubiquitin ligase complex IEP Neighborhood
MF GO:0080161 auxin transmembrane transporter activity IEP Neighborhood
BP GO:0080188 RNA-directed DNA methylation IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:0090342 regulation of cell aging IEP Neighborhood
BP GO:0090696 post-embryonic plant organ development IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
CC GO:0097708 intracellular vesicle IEP Neighborhood
BP GO:0098586 cellular response to virus IEP Neighborhood
CC GO:0098791 Golgi subcompartment IEP Neighborhood
CC GO:0099080 supramolecular complex IEP Neighborhood
CC GO:0099081 supramolecular polymer IEP Neighborhood
CC GO:0099512 supramolecular fiber IEP Neighborhood
CC GO:0099513 polymeric cytoskeletal fiber IEP Neighborhood
BP GO:1900908 regulation of olefin metabolic process IEP Neighborhood
BP GO:1900911 regulation of olefin biosynthetic process IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
BP GO:1901421 positive regulation of response to alcohol IEP Neighborhood
BP GO:1901605 alpha-amino acid metabolic process IEP Neighborhood
BP GO:1901607 alpha-amino acid biosynthetic process IEP Neighborhood
BP GO:1901879 regulation of protein depolymerization IEP Neighborhood
BP GO:1901880 negative regulation of protein depolymerization IEP Neighborhood
BP GO:1902410 mitotic cytokinetic process IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
BP GO:1902904 negative regulation of supramolecular fiber organization IEP Neighborhood
BP GO:1903047 mitotic cell cycle process IEP Neighborhood
BP GO:1905959 positive regulation of cellular response to alcohol IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
BP GO:2000603 regulation of secondary growth IEP Neighborhood
BP GO:2000604 negative regulation of secondary growth IEP Neighborhood
InterPro domains Description Start Stop
IPR009828 DUF1394 59 215
IPR008081 Cytoplasmic_FMR1-int 398 1240
No external refs found!