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  5. MA_10435407g0010

MA_10435407g0010


Description : component eIF4E of eIF4F mRNA unwinding complex. component eIF-iso4E of eIF-iso4F unwinding complex


Gene families : OG0001900 (Archaeplastida) Phylogenetic Tree(s): OG0001900_tree ,
OG_05_0001753 (LandPlants) Phylogenetic Tree(s): OG_05_0001753_tree ,
OG_06_0002228 (SeedPlants) Phylogenetic Tree(s): OG_06_0002228_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10435407g0010
Cluster HCCA: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
AT1G29550 No alias Eukaryotic initiation factor 4E protein 0.03 Archaeplastida
GSVIVT01027903001 No alias Protein biosynthesis.translation initiation.mRNA... 0.03 Archaeplastida
Pp3c2_32310V3.1 No alias eukaryotic translation initiation factor 4E 0.04 Archaeplastida
Zm00001e018268_P001 No alias component eIF4E of eIF4F mRNA unwinding complex 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0003743 translation initiation factor activity IEA Interproscan
BP GO:0006413 translational initiation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0004298 threonine-type endopeptidase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005759 mitochondrial matrix IEP Neighborhood
CC GO:0005839 proteasome core complex IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006777 Mo-molybdopterin cofactor biosynthetic process IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
BP GO:0019720 Mo-molybdopterin cofactor metabolic process IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Neighborhood
CC GO:0031974 membrane-enclosed lumen IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
CC GO:0043233 organelle lumen IEP Neighborhood
BP GO:0043545 molybdopterin cofactor metabolic process IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP Neighborhood
BP GO:0051189 prosthetic group metabolic process IEP Neighborhood
MF GO:0070003 threonine-type peptidase activity IEP Neighborhood
CC GO:0070013 intracellular organelle lumen IEP Neighborhood
BP GO:0070070 proton-transporting V-type ATPase complex assembly IEP Neighborhood
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP Neighborhood
BP GO:0070072 vacuolar proton-transporting V-type ATPase complex assembly IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
CC GO:0097525 spliceosomal snRNP complex IEP Neighborhood
CC GO:0097526 spliceosomal tri-snRNP complex IEP Neighborhood
CC GO:0120114 Sm-like protein family complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001040 TIF_eIF_4E 42 171
No external refs found!