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  5. MA_10435451g0030

MA_10435451g0030


Description : Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis thaliana (sp|q9c5x4|atx1_arath : 94.0)


Gene families : OG0004479 (Archaeplastida) Phylogenetic Tree(s): OG0004479_tree ,
OG_05_0004689 (LandPlants) Phylogenetic Tree(s): OG_05_0004689_tree ,
OG_06_0004089 (SeedPlants) Phylogenetic Tree(s): OG_06_0004089_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10435451g0030
Cluster HCCA: Cluster_420

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00173p00060580 evm_27.TU.AmTr_v1... Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis thaliana 0.05 Archaeplastida
AT1G77800 No alias PHD finger family protein 0.06 Archaeplastida
GSVIVT01008944001 No alias Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis thaliana 0.1 Archaeplastida
Gb_12353 No alias Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis... 0.09 Archaeplastida
Gb_35107 No alias Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis... 0.06 Archaeplastida
LOC_Os06g10690.1 No alias Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis... 0.06 Archaeplastida
Pp3c11_12900V3.1 No alias PHD finger family protein 0.02 Archaeplastida
Smo407186 No alias Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis thaliana 0.03 Archaeplastida
Solyc11g013530.3.1 No alias no hits & (original description: none) 0.11 Archaeplastida
Zm00001e030795_P001 No alias Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis... 0.08 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
CC GO:0005669 transcription factor TFIID complex IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
CC GO:0031011 Ino80 complex IEP Neighborhood
CC GO:0033202 DNA helicase complex IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0044454 nuclear chromosome part IEP Neighborhood
CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
CC GO:0070603 SWI/SNF superfamily-type complex IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood
CC GO:0097346 INO80-type complex IEP Neighborhood
CC GO:1904949 ATPase complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!