1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_10435529g0010

MA_10435529g0010


Description : scaffolding component Sec31 of coat protein complex


Gene families : OG0003180 (Archaeplastida) Phylogenetic Tree(s): OG0003180_tree ,
OG_05_0004342 (LandPlants) Phylogenetic Tree(s): OG_05_0004342_tree ,
OG_06_0005460 (SeedPlants) Phylogenetic Tree(s): OG_06_0005460_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10435529g0010
Cluster HCCA: Cluster_393

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00111p00143180 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein II (COPII) coatomer... 0.05 Archaeplastida
AMTR_s00111p00143660 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein II (COPII) coatomer... 0.04 Archaeplastida
AT3G63460 No alias transducin family protein / WD-40 repeat family protein 0.07 Archaeplastida
Cpa|evm.model.tig00001154.3 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.01 Archaeplastida
Cpa|evm.model.tig00001154.4 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.02 Archaeplastida
Cre12.g522450 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.02 Archaeplastida
GSVIVT01001441001 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.05 Archaeplastida
Gb_38895 No alias scaffolding component Sec31 of coat protein complex 0.11 Archaeplastida
MA_57417g0010 No alias scaffolding component Sec31 of coat protein complex 0.09 Archaeplastida
MA_9006479g0010 No alias scaffolding component Sec31 of coat protein complex 0.04 Archaeplastida
Mp7g09730.1 No alias scaffolding component Sec31 of coat protein complex 0.03 Archaeplastida
Pp3c1_29660V3.1 No alias transducin family protein / WD-40 repeat family protein 0.04 Archaeplastida
Smo230767 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.02 Archaeplastida
Solyc01g088020.3.1 No alias scaffolding component Sec31 of coat protein complex 0.06 Archaeplastida
Zm00001e010894_P003 No alias scaffolding component Sec31 of coat protein complex 0.06 Archaeplastida
Zm00001e035747_P003 No alias scaffolding component Sec31 of coat protein complex 0.08 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Neighborhood
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030127 COPII vesicle coat IEP Neighborhood
BP GO:0031123 RNA 3'-end processing IEP Neighborhood
BP GO:0031124 mRNA 3'-end processing IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0045454 cell redox homeostasis IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR024298 ACE1_Sec16_Sec31 64 259
No external refs found!