1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_10435839g0010

MA_10435839g0010


Description : RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana (sp|q9lqv2|rdr1_arath : 811.0)


Gene families : OG0000823 (Archaeplastida) Phylogenetic Tree(s): OG0000823_tree ,
OG_05_0002293 (LandPlants) Phylogenetic Tree(s): OG_05_0002293_tree ,
OG_06_0004327 (SeedPlants) Phylogenetic Tree(s): OG_06_0004327_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10435839g0010
Cluster HCCA: Cluster_157

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01011643001 No alias RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana 0.05 Archaeplastida
Gb_28426 No alias RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_28429 No alias RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_28433 No alias ssRNA polymerase (RDR2) 0.02 Archaeplastida
Solyc05g007510.4.1 No alias RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e015753_P001 No alias RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana... 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0016458 gene silencing IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0031047 gene silencing by RNA IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
InterPro domains Description Start Stop
IPR007855 RNA-dep_RNA_pol_euk-typ 418 906
No external refs found!