- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : Regulator of nonsense transcripts 1 homolog OS=Arabidopsis thaliana (sp|q9fjr0|rent1_arath : 110.0)
Gene families : OG0001988 (Archaeplastida) Phylogenetic Tree(s): OG0001988_tree ,
OG_05_0006894 (LandPlants) Phylogenetic Tree(s): OG_05_0006894_tree ,
OG_06_0008017 (SeedPlants) Phylogenetic Tree(s): OG_06_0008017_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: MA_10435849g0020 | |
| Cluster | HCCA: Cluster_465 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00011p00245550 | evm_27.TU.AmTr_v1... | Regulator of nonsense transcripts 1 homolog... | 0.07 | Archaeplastida | |
| AT5G35970 | No alias | P-loop containing nucleoside triphosphate hydrolases... | 0.05 | Archaeplastida | |
| Gb_07655 | No alias | Regulator of nonsense transcripts 1 homolog... | 0.12 | Archaeplastida | |
| LOC_Os02g47560.1 | No alias | Regulator of nonsense transcripts 1 homolog... | 0.07 | Archaeplastida | |
| LOC_Os09g04440.1 | No alias | Regulator of nonsense transcripts 1 homolog... | 0.03 | Archaeplastida | |
| Mp3g22970.1 | No alias | Regulator of nonsense transcripts 1 homolog... | 0.03 | Archaeplastida | |
| Pp3c5_2640V3.1 | No alias | DNA-binding protein, putative | 0.02 | Archaeplastida | |
| Pp3c5_28660V3.1 | No alias | P-loop containing nucleoside triphosphate hydrolases... | 0.02 | Archaeplastida | |
| Smo90782 | No alias | Regulator of nonsense transcripts 1 homolog... | 0.04 | Archaeplastida | |
| Solyc03g097370.4.1 | No alias | Regulator of nonsense transcripts 1 homolog... | 0.04 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Neighborhood |
| MF | GO:0003951 | NAD+ kinase activity | IEP | Neighborhood |
| MF | GO:0004332 | fructose-bisphosphate aldolase activity | IEP | Neighborhood |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | Neighborhood |
| MF | GO:0004813 | alanine-tRNA ligase activity | IEP | Neighborhood |
| BP | GO:0006082 | organic acid metabolic process | IEP | Neighborhood |
| BP | GO:0006096 | glycolytic process | IEP | Neighborhood |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0006165 | nucleoside diphosphate phosphorylation | IEP | Neighborhood |
| BP | GO:0006399 | tRNA metabolic process | IEP | Neighborhood |
| BP | GO:0006419 | alanyl-tRNA aminoacylation | IEP | Neighborhood |
| BP | GO:0006508 | proteolysis | IEP | Neighborhood |
| BP | GO:0006520 | cellular amino acid metabolic process | IEP | Neighborhood |
| BP | GO:0006536 | glutamate metabolic process | IEP | Neighborhood |
| BP | GO:0006537 | glutamate biosynthetic process | IEP | Neighborhood |
| BP | GO:0006720 | isoprenoid metabolic process | IEP | Neighborhood |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Neighborhood |
| BP | GO:0006732 | coenzyme metabolic process | IEP | Neighborhood |
| BP | GO:0006733 | oxidoreduction coenzyme metabolic process | IEP | Neighborhood |
| BP | GO:0006739 | NADP metabolic process | IEP | Neighborhood |
| BP | GO:0006741 | NADP biosynthetic process | IEP | Neighborhood |
| BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | Neighborhood |
| BP | GO:0006757 | ATP generation from ADP | IEP | Neighborhood |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Neighborhood |
| MF | GO:0008233 | peptidase activity | IEP | Neighborhood |
| BP | GO:0008299 | isoprenoid biosynthetic process | IEP | Neighborhood |
| BP | GO:0009058 | biosynthetic process | IEP | Neighborhood |
| BP | GO:0009064 | glutamine family amino acid metabolic process | IEP | Neighborhood |
| BP | GO:0009084 | glutamine family amino acid biosynthetic process | IEP | Neighborhood |
| BP | GO:0009108 | coenzyme biosynthetic process | IEP | Neighborhood |
| BP | GO:0009117 | nucleotide metabolic process | IEP | Neighborhood |
| BP | GO:0009132 | nucleoside diphosphate metabolic process | IEP | Neighborhood |
| BP | GO:0009135 | purine nucleoside diphosphate metabolic process | IEP | Neighborhood |
| BP | GO:0009165 | nucleotide biosynthetic process | IEP | Neighborhood |
| BP | GO:0009166 | nucleotide catabolic process | IEP | Neighborhood |
| BP | GO:0009179 | purine ribonucleoside diphosphate metabolic process | IEP | Neighborhood |
| BP | GO:0009185 | ribonucleoside diphosphate metabolic process | IEP | Neighborhood |
| MF | GO:0010181 | FMN binding | IEP | Neighborhood |
| MF | GO:0015930 | glutamate synthase activity | IEP | Neighborhood |
| BP | GO:0016053 | organic acid biosynthetic process | IEP | Neighborhood |
| MF | GO:0016638 | oxidoreductase activity, acting on the CH-NH2 group of donors | IEP | Neighborhood |
| MF | GO:0016832 | aldehyde-lyase activity | IEP | Neighborhood |
| MF | GO:0016874 | ligase activity | IEP | Neighborhood |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | Neighborhood |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | Neighborhood |
| BP | GO:0019359 | nicotinamide nucleotide biosynthetic process | IEP | Neighborhood |
| BP | GO:0019362 | pyridine nucleotide metabolic process | IEP | Neighborhood |
| BP | GO:0019363 | pyridine nucleotide biosynthetic process | IEP | Neighborhood |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Neighborhood |
| BP | GO:0019637 | organophosphate metabolic process | IEP | Neighborhood |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | Neighborhood |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Neighborhood |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Neighborhood |
| MF | GO:0036094 | small molecule binding | IEP | Neighborhood |
| BP | GO:0042866 | pyruvate biosynthetic process | IEP | Neighborhood |
| BP | GO:0043038 | amino acid activation | IEP | Neighborhood |
| BP | GO:0043039 | tRNA aminoacylation | IEP | Neighborhood |
| MF | GO:0043168 | anion binding | IEP | Neighborhood |
| BP | GO:0043436 | oxoacid metabolic process | IEP | Neighborhood |
| BP | GO:0043648 | dicarboxylic acid metabolic process | IEP | Neighborhood |
| BP | GO:0043650 | dicarboxylic acid biosynthetic process | IEP | Neighborhood |
| BP | GO:0044238 | primary metabolic process | IEP | Neighborhood |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Neighborhood |
| BP | GO:0044281 | small molecule metabolic process | IEP | Neighborhood |
| BP | GO:0044283 | small molecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0046031 | ADP metabolic process | IEP | Neighborhood |
| BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | Neighborhood |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Neighborhood |
| BP | GO:0046496 | nicotinamide nucleotide metabolic process | IEP | Neighborhood |
| BP | GO:0046939 | nucleotide phosphorylation | IEP | Neighborhood |
| MF | GO:0050662 | coenzyme binding | IEP | Neighborhood |
| BP | GO:0051186 | cofactor metabolic process | IEP | Neighborhood |
| BP | GO:0051188 | cofactor biosynthetic process | IEP | Neighborhood |
| BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | Neighborhood |
| BP | GO:0071704 | organic substance metabolic process | IEP | Neighborhood |
| MF | GO:0071949 | FAD binding | IEP | Neighborhood |
| BP | GO:0072524 | pyridine-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0072525 | pyridine-containing compound biosynthetic process | IEP | Neighborhood |
| BP | GO:0090407 | organophosphate biosynthetic process | IEP | Neighborhood |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Neighborhood |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Neighborhood |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Neighborhood |
| BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | Neighborhood |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Neighborhood |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Neighborhood |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |