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  5. MA_10435977g0020

MA_10435977g0020


Description : Methyl-CpG-binding domain-containing protein 9 OS=Arabidopsis thaliana (sp|q9sgh2|mbd9_arath : 236.0)


Gene families : OG0005252 (Archaeplastida) Phylogenetic Tree(s): OG0005252_tree ,
OG_05_0005859 (LandPlants) Phylogenetic Tree(s): OG_05_0005859_tree ,
OG_06_0029912 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10435977g0020
Cluster HCCA: Cluster_485

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00267510 evm_27.TU.AmTr_v1... Methyl-CpG-binding domain-containing protein 9... 0.03 Archaeplastida
AT3G01460 ATMBD9, MBD9 methyl-CPG-binding domain 9 0.1 Archaeplastida
Cpa|evm.model.tig00001384.4 No alias No description available 0.02 Archaeplastida
Gb_22434 No alias Methyl-CpG-binding domain-containing protein 9... 0.08 Archaeplastida
Mp8g01420.1 No alias Methyl-CpG-binding domain-containing protein 9... 0.08 Archaeplastida
Pp3c1_860V3.1 No alias methyl-CPG-binding domain 9 0.02 Archaeplastida
Pp3c2_35750V3.1 No alias methyl-CPG-binding domain 9 0.02 Archaeplastida
Pp3c5_19640V3.1 No alias methyl-CPG-binding domain 9 0.03 Archaeplastida
Pp3c6_8120V3.1 No alias methyl-CPG-binding domain 9 0.09 Archaeplastida
Solyc05g005640.4.1 No alias Methyl-CpG-binding domain-containing protein 9... 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004525 ribonuclease III activity IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR028941 WHIM2_dom 370 513
No external refs found!