MA_10436047g0010

Description : transcription factor (GATA)

Gene families : OG0000094 (Archaeplastida) Phylogenetic Tree(s): OG0000094_tree ,
OG_05_0000055 (LandPlants) Phylogenetic Tree(s): OG_05_0000055_tree ,
OG_06_0000264 (SeedPlants) Phylogenetic Tree(s): OG_06_0000264_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_10436047g0010
Cluster	HCCA: Cluster_202

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00004p00074220	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.04	Archaeplastida
AMTR_s00057p00121410	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.03	Archaeplastida
AMTR_s00106p00136770	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.03	Archaeplastida
AT2G45050	GATA2	GATA transcription factor 2	0.02	Archaeplastida
AT3G20750	GATA29	GATA transcription factor 29	0.03	Archaeplastida
AT4G16141	No alias	GATA type zinc finger transcription factor family protein	0.02	Archaeplastida
GSVIVT01035048001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.04	Archaeplastida
GSVIVT01035614001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.04	Archaeplastida
Gb_06864	No alias	transcription factor (GATA)	0.03	Archaeplastida
Gb_34837	No alias	transcription factor (GATA)	0.03	Archaeplastida
LOC_Os01g74540.1	No alias	transcription factor (GATA)	0.02	Archaeplastida
LOC_Os04g45650.2	No alias	transcription factor (GATA)	0.02	Archaeplastida
LOC_Os05g49280.1	No alias	transcription factor (GATA)	0.03	Archaeplastida
LOC_Os10g40810.1	No alias	transcription factor (GATA)	0.06	Archaeplastida
Pp3c20_22630V3.1	No alias	GATA transcription factor 9	0.03	Archaeplastida
Pp3c20_22670V3.1	No alias	GATA transcription factor 9	0.02	Archaeplastida
Solyc03g120890.3.1	No alias	transcription factor (GATA)	0.03	Archaeplastida
Solyc08g066510.3.1	No alias	transcription factor (GATA)	0.04	Archaeplastida
Solyc10g018560.2.1	No alias	transcription factor (GATA)	0.03	Archaeplastida
Solyc12g008830.3.1	No alias	transcription factor (GATA)	0.06	Archaeplastida
Zm00001e015260_P001	No alias	transcription factor (GATA)	0.03	Archaeplastida
Zm00001e017604_P001	No alias	transcription factor (GATA)	0.02	Archaeplastida
Zm00001e027439_P001	No alias	transcription factor (GATA)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000105	histidine biosynthetic process	IEP	Neighborhood
CC	GO:0000786	nucleosome	IEP	Neighborhood
MF	GO:0003879	ATP phosphoribosyltransferase activity	IEP	Neighborhood
MF	GO:0003993	acid phosphatase activity	IEP	Neighborhood
CC	GO:0005576	extracellular region	IEP	Neighborhood
CC	GO:0005618	cell wall	IEP	Neighborhood
CC	GO:0005737	cytoplasm	IEP	Neighborhood
BP	GO:0006547	histidine metabolic process	IEP	Neighborhood
BP	GO:0008652	cellular amino acid biosynthetic process	IEP	Neighborhood
BP	GO:0009072	aromatic amino acid family metabolic process	IEP	Neighborhood
BP	GO:0009073	aromatic amino acid family biosynthetic process	IEP	Neighborhood
MF	GO:0016757	transferase activity, transferring glycosyl groups	IEP	Neighborhood
MF	GO:0016762	xyloglucan:xyloglucosyl transferase activity	IEP	Neighborhood
MF	GO:0016763	transferase activity, transferring pentosyl groups	IEP	Neighborhood
MF	GO:0016787	hydrolase activity	IEP	Neighborhood
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	Neighborhood
MF	GO:0016791	phosphatase activity	IEP	Neighborhood
CC	GO:0030312	external encapsulating structure	IEP	Neighborhood
CC	GO:0032993	protein-DNA complex	IEP	Neighborhood
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	Neighborhood
CC	GO:0044422	organelle part	IEP	Neighborhood
CC	GO:0044424	intracellular part	IEP	Neighborhood
CC	GO:0044427	chromosomal part	IEP	Neighborhood
CC	GO:0044446	intracellular organelle part	IEP	Neighborhood
CC	GO:0044464	cell part	IEP	Neighborhood
CC	GO:0044815	DNA packaging complex	IEP	Neighborhood
CC	GO:0048046	apoplast	IEP	Neighborhood
BP	GO:0052803	imidazole-containing compound metabolic process	IEP	Neighborhood
BP	GO:1901605	alpha-amino acid metabolic process	IEP	Neighborhood
BP	GO:1901607	alpha-amino acid biosynthetic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000679	Znf_GATA	140	174

External Links

No external refs found!

MA_10436047g0010

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation