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  5. MA_10436152g0020

MA_10436152g0020


Description : no hits & (original description: none)


Gene families : OG0004096 (Archaeplastida) Phylogenetic Tree(s): OG0004096_tree ,
OG_05_0002292 (LandPlants) Phylogenetic Tree(s): OG_05_0002292_tree ,
OG_06_0002271 (SeedPlants) Phylogenetic Tree(s): OG_06_0002271_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10436152g0020
Cluster HCCA: Cluster_485

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00173060 evm_27.TU.AmTr_v1... Protein MODIFIER OF SNC1 1 OS=Arabidopsis thaliana 0.04 Archaeplastida
AT4G24680 MOS1 modifier of snc1 0.04 Archaeplastida
GSVIVT01007703001 No alias Protein MODIFIER OF SNC1 1 OS=Arabidopsis thaliana 0.08 Archaeplastida
Gb_16752 No alias Protein MODIFIER OF SNC1 1 OS=Arabidopsis thaliana... 0.1 Archaeplastida
LOC_Os12g37860.1 No alias Protein MODIFIER OF SNC1 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp7g05710.1 No alias Protein MODIFIER OF SNC1 1 OS=Arabidopsis thaliana... 0.07 Archaeplastida
Pp3c26_2830V3.1 No alias modifier of snc1 0.03 Archaeplastida
Pp3c4_23740V3.1 No alias modifier of snc1 0.06 Archaeplastida
Smo443140 No alias Protein MODIFIER OF SNC1 1 OS=Arabidopsis thaliana 0.07 Archaeplastida
Solyc03g112660.3.1 No alias Protein MODIFIER OF SNC1 1 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Zm00001e018200_P001 No alias Protein MODIFIER OF SNC1 1 OS=Arabidopsis thaliana... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
CC GO:0005669 transcription factor TFIID complex IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!