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Description : ssDNA-binding protein (OSB)
Gene families : OG0001359 (Archaeplastida) Phylogenetic Tree(s): OG0001359_tree ,
OG_05_0001061 (LandPlants) Phylogenetic Tree(s): OG_05_0001061_tree ,
OG_06_0003420 (SeedPlants) Phylogenetic Tree(s): OG_06_0003420_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: MA_10436156g0010 | |
| Cluster | HCCA: Cluster_197 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| GSVIVT01029254001 | No alias | RNA biosynthesis.organelle machineries.RNA polymerase... | 0.03 | Archaeplastida | |
| Gb_13980 | No alias | ssDNA-binding protein (OSB) | 0.07 | Archaeplastida | |
| LOC_Os03g43420.1 | No alias | ssDNA-binding protein (OSB) | 0.02 | Archaeplastida | |
| Solyc09g007430.1.1 | No alias | ssDNA-binding protein (OSB). TAC9 cofactor of... | 0.05 | Archaeplastida | |
| Solyc09g065840.3.1 | No alias | ssDNA-binding protein (OSB) | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003697 | single-stranded DNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004222 | metalloendopeptidase activity | IEP | Neighborhood |
| BP | GO:0006364 | rRNA processing | IEP | Neighborhood |
| MF | GO:0008237 | metallopeptidase activity | IEP | Neighborhood |
| MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
| BP | GO:0009314 | response to radiation | IEP | Neighborhood |
| BP | GO:0009416 | response to light stimulus | IEP | Neighborhood |
| BP | GO:0009581 | detection of external stimulus | IEP | Neighborhood |
| BP | GO:0009582 | detection of abiotic stimulus | IEP | Neighborhood |
| BP | GO:0009583 | detection of light stimulus | IEP | Neighborhood |
| BP | GO:0009584 | detection of visible light | IEP | Neighborhood |
| BP | GO:0009605 | response to external stimulus | IEP | Neighborhood |
| BP | GO:0009628 | response to abiotic stimulus | IEP | Neighborhood |
| BP | GO:0016072 | rRNA metabolic process | IEP | Neighborhood |
| MF | GO:0016866 | intramolecular transferase activity | IEP | Neighborhood |
| MF | GO:0016868 | intramolecular transferase activity, phosphotransferases | IEP | Neighborhood |
| BP | GO:0018298 | protein-chromophore linkage | IEP | Neighborhood |
| CC | GO:0019867 | outer membrane | IEP | Neighborhood |
| BP | GO:0034470 | ncRNA processing | IEP | Neighborhood |
| CC | GO:0043190 | ATP-binding cassette (ABC) transporter complex | IEP | Neighborhood |
| CC | GO:0044459 | plasma membrane part | IEP | Neighborhood |
| MF | GO:0046914 | transition metal ion binding | IEP | Neighborhood |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | Neighborhood |
| MF | GO:0051539 | 4 iron, 4 sulfur cluster binding | IEP | Neighborhood |
| MF | GO:0051540 | metal cluster binding | IEP | Neighborhood |
| BP | GO:0051606 | detection of stimulus | IEP | Neighborhood |
| CC | GO:0098533 | ATPase dependent transmembrane transport complex | IEP | Neighborhood |
| CC | GO:0098797 | plasma membrane protein complex | IEP | Neighborhood |
| CC | GO:1902495 | transmembrane transporter complex | IEP | Neighborhood |
| CC | GO:1904949 | ATPase complex | IEP | Neighborhood |
| CC | GO:1990351 | transporter complex | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000424 | Primosome_PriB/ssb | 106 | 199 |
| No external refs found! |