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  5. MA_10436298g0010

MA_10436298g0010


Description : component SPT20/ADA5 of SAGA transcription co-activator complex


Gene families : OG0005278 (Archaeplastida) Phylogenetic Tree(s): OG0005278_tree ,
OG_05_0005424 (LandPlants) Phylogenetic Tree(s): OG_05_0005424_tree ,
OG_06_0016029 (SeedPlants) Phylogenetic Tree(s): OG_06_0016029_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10436298g0010
Cluster HCCA: Cluster_522

Target Alias Description ECC score Gene Family Method Actions
AT1G72390 No alias CONTAINS InterPro DOMAIN/s: Spt20 family... 0.04 Archaeplastida
Cpa|evm.model.tig00021127.5 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.01 Archaeplastida
GSVIVT01016716001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.03 Archaeplastida
LOC_Os10g25200.1 No alias component SPT20/ADA5 of SAGA transcription co-activator complex 0.04 Archaeplastida
MA_114383g0010 No alias component SPT20/ADA5 of SAGA transcription co-activator complex 0.03 Archaeplastida
Mp2g19910.1 No alias component SPT20/ADA5 of SAGA transcription co-activator complex 0.04 Archaeplastida
Pp3c13_8340V3.1 No alias No annotation 0.02 Archaeplastida
Pp3c3_3510V3.1 No alias No annotation 0.02 Archaeplastida
Solyc06g063010.4.1 No alias component SPT20/ADA5 of SAGA transcription co-activator complex 0.04 Archaeplastida
Zm00001e024750_P001 No alias component SPT20/ADA5 of SAGA transcription co-activator complex 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
BP GO:0006904 vesicle docking involved in exocytosis IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0022406 membrane docking IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0048278 vesicle docking IEP Neighborhood
BP GO:0051640 organelle localization IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
BP GO:0140029 exocytic process IEP Neighborhood
BP GO:0140056 organelle localization by membrane tethering IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!