MA_10436323g0010

Description : Putative disease resistance protein RGA3 OS=Solanum bulbocastanum (sp|q7xa40|rga3_solbu : 143.0)

Gene families : OG0000088 (Archaeplastida) Phylogenetic Tree(s): OG0000088_tree ,
OG_05_0000027 (LandPlants) Phylogenetic Tree(s): OG_05_0000027_tree ,
OG_06_0000258 (SeedPlants) Phylogenetic Tree(s): OG_06_0000258_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_10436323g0010
Cluster	HCCA: Cluster_267

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00006p00245940	evm_27.TU.AmTr_v1...	Disease resistance protein RPP8 OS=Arabidopsis thaliana	0.03	Archaeplastida
AMTR_s00006p00263750	evm_27.TU.AmTr_v1...	Disease resistance protein RPM1 OS=Arabidopsis thaliana	0.02	Archaeplastida
AMTR_s00061p00165400	evm_27.TU.AmTr_v1...	Disease resistance protein RPM1 OS=Arabidopsis thaliana	0.02	Archaeplastida
AMTR_s00090p00087950	evm_27.TU.AmTr_v1...	Disease resistance protein RPP13 OS=Arabidopsis thaliana	0.03	Archaeplastida
LOC_Os11g11960.1	No alias	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.02	Archaeplastida
LOC_Os11g11990.1	No alias	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.03	Archaeplastida
LOC_Os11g12340.2	No alias	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.03	Archaeplastida
MA_10297274g0010	No alias	Putative disease resistance protein RGA4 OS=Solanum...	0.03	Archaeplastida
MA_10429865g0010	No alias	Disease resistance RPP13-like protein 4 OS=Arabidopsis...	0.02	Archaeplastida
MA_193082g0010	No alias	Disease resistance RPP13-like protein 4 OS=Arabidopsis...	0.04	Archaeplastida
MA_6828207g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
Solyc04g009690.2.1	No alias	Disease resistance protein RPP13 OS=Arabidopsis thaliana...	0.02	Archaeplastida
Solyc08g005440.3.1	No alias	RPM1 effector-triggered immunity CC-NLR-type effector receptor	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004386	helicase activity	IEP	Neighborhood
BP	GO:0006260	DNA replication	IEP	Neighborhood
MF	GO:0046983	protein dimerization activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	166	420

External Links

No external refs found!