MA_10436365g0010

Description : meiotic crossover formation factor (FANCD2)

Gene families : OG0003318 (Archaeplastida) Phylogenetic Tree(s): OG0003318_tree ,
OG_05_0007099 (LandPlants) Phylogenetic Tree(s): OG_05_0007099_tree ,
OG_06_0006475 (SeedPlants) Phylogenetic Tree(s): OG_06_0006475_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_10436365g0010
Cluster	HCCA: Cluster_256

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00092p00164660	evm_27.TU.AmTr_v1...	Cell cycle.mitosis and meiosis.meiotic...	0.01	Archaeplastida
Cre10.g453650	No alias	No description available	0.01	Archaeplastida
Gb_40799	No alias	meiotic crossover formation factor (FANCD2)	0.03	Archaeplastida
Pp3c3_20180V3.1	No alias	No annotation	0.02	Archaeplastida
Zm00001e011509_P002	No alias	meiotic crossover formation factor (FANCD2)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006281	DNA repair	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006974	cellular response to DNA damage stimulus	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0008483	transaminase activity	IEP	Neighborhood
MF	GO:0016769	transferase activity, transferring nitrogenous groups	IEP	Neighborhood
MF	GO:0019842	vitamin binding	IEP	Neighborhood
MF	GO:0030170	pyridoxal phosphate binding	IEP	Neighborhood
MF	GO:0050662	coenzyme binding	IEP	Neighborhood
MF	GO:0070279	vitamin B6 binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR029448	FANCD2	4	192

External Links

No external refs found!