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Description : no hits & (original description: none)
Gene families : OG0005278 (Archaeplastida) Phylogenetic Tree(s): OG0005278_tree ,
OG_05_0005424 (LandPlants) Phylogenetic Tree(s): OG_05_0005424_tree ,
OG_06_0008278 (SeedPlants) Phylogenetic Tree(s): OG_06_0008278_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: MA_10436398g0010 | |
| Cluster | HCCA: Cluster_437 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G72390 | No alias | CONTAINS InterPro DOMAIN/s: Spt20 family... | 0.06 | Archaeplastida | |
| Cpa|evm.model.tig00021127.5 | No alias | RNA biosynthesis.RNA polymerase II-dependent... | 0.02 | Archaeplastida | |
| GSVIVT01016716001 | No alias | RNA biosynthesis.RNA polymerase II-dependent... | 0.08 | Archaeplastida | |
| LOC_Os01g02860.1 | No alias | component SPT20/ADA5 of SAGA transcription co-activator complex | 0.01 | Archaeplastida | |
| LOC_Os10g25200.1 | No alias | component SPT20/ADA5 of SAGA transcription co-activator complex | 0.09 | Archaeplastida | |
| MA_114383g0010 | No alias | component SPT20/ADA5 of SAGA transcription co-activator complex | 0.01 | Archaeplastida | |
| Mp2g19910.1 | No alias | component SPT20/ADA5 of SAGA transcription co-activator complex | 0.04 | Archaeplastida | |
| Pp3c13_8340V3.1 | No alias | No annotation | 0.08 | Archaeplastida | |
| Pp3c3_3510V3.1 | No alias | No annotation | 0.02 | Archaeplastida | |
| Solyc06g063010.4.1 | No alias | component SPT20/ADA5 of SAGA transcription co-activator complex | 0.06 | Archaeplastida | |
| Zm00001e024750_P001 | No alias | component SPT20/ADA5 of SAGA transcription co-activator complex | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Neighborhood |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Neighborhood |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Neighborhood |
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003723 | RNA binding | IEP | Neighborhood |
| MF | GO:0005515 | protein binding | IEP | Neighborhood |
| BP | GO:0006396 | RNA processing | IEP | Neighborhood |
| BP | GO:0006606 | protein import into nucleus | IEP | Neighborhood |
| BP | GO:0006886 | intracellular protein transport | IEP | Neighborhood |
| BP | GO:0006890 | retrograde vesicle-mediated transport, Golgi to ER | IEP | Neighborhood |
| BP | GO:0006913 | nucleocytoplasmic transport | IEP | Neighborhood |
| BP | GO:0008104 | protein localization | IEP | Neighborhood |
| BP | GO:0008380 | RNA splicing | IEP | Neighborhood |
| MF | GO:0008536 | Ran GTPase binding | IEP | Neighborhood |
| BP | GO:0015031 | protein transport | IEP | Neighborhood |
| BP | GO:0015833 | peptide transport | IEP | Neighborhood |
| MF | GO:0017016 | Ras GTPase binding | IEP | Neighborhood |
| BP | GO:0017038 | protein import | IEP | Neighborhood |
| MF | GO:0017069 | snRNA binding | IEP | Neighborhood |
| MF | GO:0017070 | U6 snRNA binding | IEP | Neighborhood |
| MF | GO:0019899 | enzyme binding | IEP | Neighborhood |
| MF | GO:0030623 | U5 snRNA binding | IEP | Neighborhood |
| MF | GO:0031267 | small GTPase binding | IEP | Neighborhood |
| BP | GO:0033036 | macromolecule localization | IEP | Neighborhood |
| BP | GO:0033365 | protein localization to organelle | IEP | Neighborhood |
| BP | GO:0034504 | protein localization to nucleus | IEP | Neighborhood |
| BP | GO:0034613 | cellular protein localization | IEP | Neighborhood |
| BP | GO:0042886 | amide transport | IEP | Neighborhood |
| BP | GO:0045184 | establishment of protein localization | IEP | Neighborhood |
| BP | GO:0046907 | intracellular transport | IEP | Neighborhood |
| BP | GO:0048193 | Golgi vesicle transport | IEP | Neighborhood |
| MF | GO:0051020 | GTPase binding | IEP | Neighborhood |
| BP | GO:0051169 | nuclear transport | IEP | Neighborhood |
| BP | GO:0051170 | import into nucleus | IEP | Neighborhood |
| BP | GO:0051641 | cellular localization | IEP | Neighborhood |
| BP | GO:0051649 | establishment of localization in cell | IEP | Neighborhood |
| BP | GO:0070727 | cellular macromolecule localization | IEP | Neighborhood |
| BP | GO:0071702 | organic substance transport | IEP | Neighborhood |
| BP | GO:0071705 | nitrogen compound transport | IEP | Neighborhood |
| BP | GO:0072594 | establishment of protein localization to organelle | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |