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Description : Probable polygalacturonase OS=Vitis vinifera (sp|a7pzl3|pglr_vitvi : 284.0) & Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 29.9)
Gene families : OG0000349 (Archaeplastida) Phylogenetic Tree(s): OG0000349_tree ,
OG_05_0032556 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0029920 (SeedPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: MA_10436451g0020 | |
| Cluster | HCCA: Cluster_310 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G19170 | No alias | Pectin lyase-like superfamily protein | 0.02 | Archaeplastida | |
| AT4G23500 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
| GSVIVT01026985001 | No alias | Probable polygalacturonase OS=Vitis vinifera | 0.02 | Archaeplastida | |
| GSVIVT01028860001 | No alias | Probable polygalacturonase OS=Vitis vinifera | 0.03 | Archaeplastida | |
| LOC_Os01g43160.1 | No alias | Probable polygalacturonase OS=Vitis vinifera... | 0.03 | Archaeplastida | |
| Pp3c6_7160V3.1 | No alias | Pectin lyase-like superfamily protein | 0.02 | Archaeplastida | |
| Solyc12g009210.2.1 | No alias | Probable polygalacturonase OS=Vitis vinifera... | 0.03 | Archaeplastida | |
| Zm00001e021051_P001 | No alias | Probable polygalacturonase OS=Vitis vinifera... | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004650 | polygalacturonase activity | IEA | Interproscan |
| BP | GO:0005975 | carbohydrate metabolic process | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004180 | carboxypeptidase activity | IEP | Neighborhood |
| MF | GO:0004185 | serine-type carboxypeptidase activity | IEP | Neighborhood |
| MF | GO:0004518 | nuclease activity | IEP | Neighborhood |
| MF | GO:0004519 | endonuclease activity | IEP | Neighborhood |
| BP | GO:0006259 | DNA metabolic process | IEP | Neighborhood |
| BP | GO:0006308 | DNA catabolic process | IEP | Neighborhood |
| MF | GO:0008238 | exopeptidase activity | IEP | Neighborhood |
| BP | GO:0009057 | macromolecule catabolic process | IEP | Neighborhood |
| BP | GO:0019439 | aromatic compound catabolic process | IEP | Neighborhood |
| BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | Neighborhood |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | Neighborhood |
| BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | Neighborhood |
| BP | GO:0046700 | heterocycle catabolic process | IEP | Neighborhood |
| MF | GO:0070008 | serine-type exopeptidase activity | IEP | Neighborhood |
| BP | GO:1901361 | organic cyclic compound catabolic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000743 | Glyco_hydro_28 | 9 | 195 |
| No external refs found! |