MA_10436455g0010


Description : DNA repair protein (XRCC1)


Gene families : OG0004915 (Archaeplastida) Phylogenetic Tree(s): OG0004915_tree ,
OG_05_0013346 (LandPlants) Phylogenetic Tree(s): OG_05_0013346_tree ,
OG_06_0013367 (SeedPlants) Phylogenetic Tree(s): OG_06_0013367_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10436455g0010
Cluster HCCA: Cluster_407

Target Alias Description ECC score Gene Family Method Actions
Solyc06g066780.3.1 No alias DNA repair protein (XRCC1) 0.02 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0000012 single strand break repair IEA Interproscan
MF GO:0003684 damaged DNA binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
BP GO:0043631 RNA polyadenylation IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
MF GO:0070566 adenylyltransferase activity IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002706 Xrcc1_N 7 140
IPR001357 BRCT_dom 312 361
No external refs found!