MA_10436494g0010


Description : subunit SSL2/XPB of multifunctional TFIIh complex. component SSL2/XPB of TFIIh basal transcription factor complex


Gene families : OG0004927 (Archaeplastida) Phylogenetic Tree(s): OG0004927_tree ,
OG_05_0005344 (LandPlants) Phylogenetic Tree(s): OG_05_0005344_tree ,
OG_06_0006451 (SeedPlants) Phylogenetic Tree(s): OG_06_0006451_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10436494g0010
Cluster HCCA: Cluster_407

Target Alias Description ECC score Gene Family Method Actions
AT5G41370 XPB1, ATXPB1 homolog of xeroderma pigmentosum complementation group B 1 0.02 Archaeplastida
GSVIVT01019392001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.03 Archaeplastida
LOC_Os01g49680.1 No alias subunit SSL2/XPB of multifunctional TFIIh complex.... 0.05 Archaeplastida
Pp3c6_13890V3.1 No alias homolog of Xeroderma pigmentosum complementation group B 2 0.02 Archaeplastida
Smo147068 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016787 hydrolase activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003756 protein disulfide isomerase activity IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
BP GO:0010921 regulation of phosphatase activity IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016860 intramolecular oxidoreductase activity IEP Neighborhood
MF GO:0016864 intramolecular oxidoreductase activity, transposing S-S bonds IEP Neighborhood
BP GO:0019220 regulation of phosphate metabolic process IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
MF GO:0019902 phosphatase binding IEP Neighborhood
MF GO:0019903 protein phosphatase binding IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
BP GO:0031399 regulation of protein modification process IEP Neighborhood
BP GO:0032268 regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0035303 regulation of dephosphorylation IEP Neighborhood
BP GO:0035304 regulation of protein dephosphorylation IEP Neighborhood
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP Neighborhood
BP GO:0050790 regulation of catalytic activity IEP Neighborhood
BP GO:0051174 regulation of phosphorus metabolic process IEP Neighborhood
BP GO:0051246 regulation of protein metabolic process IEP Neighborhood
BP GO:0051336 regulation of hydrolase activity IEP Neighborhood
BP GO:0065009 regulation of molecular function IEP Neighborhood
InterPro domains Description Start Stop
IPR006935 Helicase/UvrB_N 15 154
IPR032438 ERCC3_RAD25_C 180 216
No external refs found!