MA_10436603g0020


Description : chromatin remodeling factor (ERCC6)


Gene families : OG0006891 (Archaeplastida) Phylogenetic Tree(s): OG0006891_tree ,
OG_05_0008152 (LandPlants) Phylogenetic Tree(s): OG_05_0008152_tree ,
OG_06_0008705 (SeedPlants) Phylogenetic Tree(s): OG_06_0008705_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10436603g0020
Cluster HCCA: Cluster_478

Target Alias Description ECC score Gene Family Method Actions
Gb_00033 No alias Switch 2 OS=Arabidopsis thaliana (sp|f4i2h2|chr9_arath : 298.0) 0.03 Archaeplastida
Solyc07g053870.4.1 No alias chromatin remodeling factor (ERCC6) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
BP GO:0043631 RNA polyadenylation IEP Neighborhood
MF GO:0070566 adenylyltransferase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR000330 SNF2_N 63 314
No external refs found!