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Description : pectin acetylesterase
Gene families : OG0000465 (Archaeplastida) Phylogenetic Tree(s): OG0000465_tree ,
OG_05_0000277 (LandPlants) Phylogenetic Tree(s): OG_05_0000277_tree ,
OG_06_0006902 (SeedPlants) Phylogenetic Tree(s): OG_06_0006902_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: MA_10436630g0010 | |
| Cluster | HCCA: Cluster_25 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00012p00191170 | evm_27.TU.AmTr_v1... | Cell wall.pectin.modification and degradation.pectin... | 0.03 | Archaeplastida | |
| AT4G19410 | No alias | Pectinacetylesterase family protein | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0016787 | hydrolase activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Neighborhood |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Neighborhood |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Neighborhood |
| MF | GO:0004177 | aminopeptidase activity | IEP | Neighborhood |
| MF | GO:0004180 | carboxypeptidase activity | IEP | Neighborhood |
| MF | GO:0004185 | serine-type carboxypeptidase activity | IEP | Neighborhood |
| BP | GO:0006396 | RNA processing | IEP | Neighborhood |
| BP | GO:0006397 | mRNA processing | IEP | Neighborhood |
| BP | GO:0006508 | proteolysis | IEP | Neighborhood |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Neighborhood |
| MF | GO:0008233 | peptidase activity | IEP | Neighborhood |
| MF | GO:0008236 | serine-type peptidase activity | IEP | Neighborhood |
| MF | GO:0008238 | exopeptidase activity | IEP | Neighborhood |
| BP | GO:0008380 | RNA splicing | IEP | Neighborhood |
| BP | GO:0016071 | mRNA metabolic process | IEP | Neighborhood |
| MF | GO:0017171 | serine hydrolase activity | IEP | Neighborhood |
| CC | GO:0030532 | small nuclear ribonucleoprotein complex | IEP | Neighborhood |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Neighborhood |
| CC | GO:0044428 | nuclear part | IEP | Neighborhood |
| CC | GO:0046540 | U4/U6 x U5 tri-snRNP complex | IEP | Neighborhood |
| MF | GO:0070008 | serine-type exopeptidase activity | IEP | Neighborhood |
| MF | GO:0070011 | peptidase activity, acting on L-amino acid peptides | IEP | Neighborhood |
| CC | GO:0097525 | spliceosomal snRNP complex | IEP | Neighborhood |
| CC | GO:0097526 | spliceosomal tri-snRNP complex | IEP | Neighborhood |
| CC | GO:0120114 | Sm-like protein family complex | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004963 | PAE/NOTUM | 5 | 238 |
| No external refs found! |