MA_10436695g0010

Description : component PIROGI of SCAR/WAVE ARP2/3-activating complex

Gene families : OG0003345 (Archaeplastida) Phylogenetic Tree(s): OG0003345_tree ,
OG_05_0003636 (LandPlants) Phylogenetic Tree(s): OG_05_0003636_tree ,
OG_06_0003898 (SeedPlants) Phylogenetic Tree(s): OG_06_0003898_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_10436695g0010
Cluster	HCCA: Cluster_85

Target	Alias	Description	ECC score	Gene Family Method
AT5G18410	SRA1, KLK, PIR,...	transcription activators	0.03	Archaeplastida
GSVIVT01026355001	No alias	Cytoskeleton.microfilament network.actin...	0.02	Archaeplastida
Gb_18362	No alias	Protein PIR OS=Arabidopsis thaliana (sp\|q5s2c3\|pir_arath : 154.0)	0.04	Archaeplastida
Gb_18365	No alias	no hits & (original description: none)	0.05	Archaeplastida
Gb_18366	No alias	Protein PIR OS=Arabidopsis thaliana (sp\|q5s2c3\|pir_arath : 156.0)	0.09	Archaeplastida
LOC_Os03g05020.1	No alias	component PIROGI of SCAR/WAVE ARP2/3-activating complex	0.04	Archaeplastida
Mp5g00460.1	No alias	component PIROGI of SCAR/WAVE ARP2/3-activating complex	0.02	Archaeplastida
Pp3c21_8020V3.1	No alias	transcription activators	0.02	Archaeplastida
Smo160351	No alias	Cytoskeleton.microfilament network.actin...	0.02	Archaeplastida
Zm00001e000353_P001	No alias	component PIROGI of SCAR/WAVE ARP2/3-activating complex	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
BP	GO:0008064	regulation of actin polymerization or depolymerization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0017016	Ras GTPase binding	None	Extended
MF	GO:0017048	Rho GTPase binding	None	Extended
MF	GO:0019899	enzyme binding	None	Extended
BP	GO:0030832	regulation of actin filament length	None	Extended
BP	GO:0030833	regulation of actin filament polymerization	IEA	Interproscan
MF	GO:0031267	small GTPase binding	None	Extended
BP	GO:0032271	regulation of protein polymerization	None	Extended
BP	GO:0032535	regulation of cellular component size	None	Extended
BP	GO:0032956	regulation of actin cytoskeleton organization	None	Extended
BP	GO:0032970	regulation of actin filament-based process	None	Extended
BP	GO:0033043	regulation of organelle organization	None	Extended
BP	GO:0043254	regulation of protein complex assembly	None	Extended
BP	GO:0044087	regulation of cellular component biogenesis	None	Extended
MF	GO:0048365	Rac GTPase binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
MF	GO:0051020	GTPase binding	None	Extended
BP	GO:0051128	regulation of cellular component organization	None	Extended
BP	GO:0051493	regulation of cytoskeleton organization	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0090066	regulation of anatomical structure size	None	Extended
BP	GO:0110053	regulation of actin filament organization	None	Extended
BP	GO:1902903	regulation of supramolecular fiber organization	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0003678	DNA helicase activity	IEP	Neighborhood
MF	GO:0004386	helicase activity	IEP	Neighborhood
MF	GO:0004540	ribonuclease activity	IEP	Neighborhood
BP	GO:0006397	mRNA processing	IEP	Neighborhood
BP	GO:0016071	mRNA metabolic process	IEP	Neighborhood
MF	GO:0140097	catalytic activity, acting on DNA	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR008081	Cytoplasmic_FMR1-int	1	226

External Links

No external refs found!

MA_10436695g0010

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation