AT5G20620 (UBQ4)


Aliases : UBQ4

Description : ubiquitin 4


Gene families : OG0000077 (Archaeplastida) Phylogenetic Tree(s): OG0000077_tree ,
OG_05_0000511 (LandPlants) Phylogenetic Tree(s): OG_05_0000511_tree ,
OG_06_0000425 (SeedPlants) Phylogenetic Tree(s): OG_06_0000425_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G20620
Cluster HCCA: Cluster_157

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00022075.50 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.01 Archaeplastida
LOC_Os05g42424.1 No alias ubiquitin-fold protein (UBQ) 0.03 Archaeplastida
MA_6985771g0010 No alias Ubiquitin-40S ribosomal protein S27a OS=Hordeum vulgare... 0.09 Archaeplastida
Zm00001e028916_P001 No alias component RPS27a of SSU proteome 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006464 cellular protein modification process ISS Interproscan
BP GO:0006511 ubiquitin-dependent protein catabolic process TAS Interproscan
Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0009799 specification of symmetry IEP Neighborhood
BP GO:0009855 determination of bilateral symmetry IEP Neighborhood
BP GO:0009944 polarity specification of adaxial/abaxial axis IEP Neighborhood
BP GO:0010014 meristem initiation IEP Neighborhood
BP GO:0010075 regulation of meristem growth IEP Neighborhood
BP GO:0065001 specification of axis polarity IEP Neighborhood
InterPro domains Description Start Stop
IPR000626 Ubiquitin_dom 231 302
IPR000626 Ubiquitin_dom 79 150
IPR000626 Ubiquitin_dom 307 378
IPR000626 Ubiquitin_dom 155 226
IPR000626 Ubiquitin_dom 3 74
No external refs found!