AT5G20670

Description : Protein of unknown function (DUF1677)

Gene families : OG0000493 (Archaeplastida) Phylogenetic Tree(s): OG0000493_tree ,
OG_05_0000254 (LandPlants) Phylogenetic Tree(s): OG_05_0000254_tree ,
OG_06_0000504 (SeedPlants) Phylogenetic Tree(s): OG_06_0000504_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G20670
Cluster	HCCA: Cluster_209

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00004p00017060	evm_27.TU.AmTr_v1...	No description available	0.03	Archaeplastida
AMTR_s00024p00245950	evm_27.TU.AmTr_v1...	No description available	0.02	Archaeplastida
AMTR_s00056p00092670	evm_27.TU.AmTr_v1...	No description available	0.02	Archaeplastida
LOC_Os03g46300.1	No alias	no hits & (original description: none)	0.05	Archaeplastida
MA_10100606g0010	No alias	no hits & (original description: none)	0.06	Archaeplastida
MA_10279500g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
Zm00001e005661_P001	No alias	no hits & (original description: none)	0.04	Archaeplastida
Zm00001e012322_P001	No alias	no hits & (original description: none)	0.06	Archaeplastida

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004518	nuclease activity	IEP	Neighborhood
MF	GO:0004527	exonuclease activity	IEP	Neighborhood
MF	GO:0005342	organic acid transmembrane transporter activity	IEP	Neighborhood
CC	GO:0005622	intracellular	IEP	Neighborhood
MF	GO:0008514	organic anion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015171	amino acid transmembrane transporter activity	IEP	Neighborhood
MF	GO:0046943	carboxylic acid transmembrane transporter activity	IEP	Neighborhood
BP	GO:0048653	anther development	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR012876	DUF1677_pln	23	110

External Links

No external refs found!